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python

TimageTK (Tissue Image Toolkit) is a Python package dedicated to image processing of multicellular architectures, such as plants or animals. It is intended for biologists, modellers and computer scientists.

The library offers an array of tools for image enhancement, transformation, and feature extraction. From mathematical morphology to filtering algorithms and peak detection, they refine image data and assist in critical processing workflows for various analysis needs.

https://mosaic.gitlabpages.inria.fr/timagetk

jax-cdl implements Low-Rank Time–Frequency Synthesis and Multivariate Convolutional Sparse Coding using jax.

Discrete Exterior Calculus library in Python mostly targeted toward multicellular tissue modeling.

documentation: https://oali.gitlabpages.inria.fr/dxtr/

Shallow Water Equation Environment for Tests, Awesome!

Static and Dynamic Optimal Control of Vitamin-Mediated Algal-Bacterial Co-Cultures under Optogenetic Regulation

An OpenAI Gym crop management environment for Reinforcement Learning (RL), based on the Decision Support System for Agrotechnology Transfer (DSSAT) crop model.

Python bindings for graph2svg rust library.

Simple example of a docker-in-docker project launched on the shared runners with good practices.

A framework for exploring the depths of hyperparameter space with Hydra and MLflow.

Various tools to run scientific computer experiments.

Implementation of CRDTp and CRDTd encapsulation mecanisms to evaluate ACCURE - see accure.rigelk.eu

Geometric processing of vector drawings in python3

A series of Jupyter notebooks and exported slides that serve as an introduction and tutorial for Hydronaut.

An SQL querybuilder written in Python.

Articulatory speech synthesizer based on physical modeling, especially designed to simulate occlusive consonants

Docker environment for perception nodes for bodies: front_fisheye_2d_body_pose_detector, 3d_body_tracker, body_to_face_mapper, group_detector

A Python driver for ANTLR4-generated code.

A tool for a numeric algorithm that computes an approximate values of the permissiveness function for general timed automata. For resource: see the chapter 6 of the thesis of Emily Clement (Section 6.1)