Commits · d3df13f8729fc6f60bf65c7968a55288f55700c0 · DEBREUVE Eric / NutriMorph

Jun 15, 2020
- solved soma_volume/convex_hull_volume issue · d3df13f8
  NADAL Morgane authored 4 years ago
  
  d3df13f8
Jun 11, 2020
- Annotated the whole Nutrimorph script, except specific fcts in Frangi, Dijkstra and SKLGraph. · d4054214
  NADAL Morgane authored 4 years ago
  
  d4054214
Jun 08, 2020
- some modifs · 4cadf915
  NADAL Morgane authored 4 years ago
  
  4cadf915
Jun 05, 2020
- working on hysteresis bug · 4a5d39df
  NADAL Morgane authored 4 years ago
  
  4a5d39df
May 04, 2020
- pandas df + length in micron + reorganisation of the code · f4675835
  NADAL Morgane authored 4 years ago
  
  f4675835
Apr 27, 2020

added soma features (volume + working on best fitting ellipsoid axes) +... · 09937e58

NADAL Morgane authored 4 years ago

added soma features (volume + working on best fitting ellipsoid axes) + modified skl brick.edge algo to support None value for calculus of edge lengths

09937e58

Apr 07, 2020
- STEP3 = find and label the root extremities of the ext+conn graphs · 698fdeb5
  NADAL Morgane authored 4 years ago
  
  698fdeb5
Apr 06, 2020
- STEP3 = find and label the root extremities of the ext+conn graphs · 882ef02a
  NADAL Morgane authored 4 years ago
  
  882ef02a
Mar 26, 2020
- right prms for frangi w/ relative intensiy normalization · 81f6e4a0
  NADAL Morgane authored 4 years ago
  
  81f6e4a0
Mar 25, 2020
- adding frangi + README in parameters.ini + ToPixel · 96d784c3
  NADAL Morgane authored 4 years ago
  
  96d784c3
- Revert "added Frangi prms + README to parameters.ini" · 5649134d
  NADAL Morgane authored 4 years ago
  
  This reverts commit efbce256
  5649134d
- added Frangi prms + README to parameters.ini · efbce256
  NADAL Morgane authored 4 years ago
  
  efbce256
Mar 20, 2020
- killed the bug leading to no ext detected (relabel fct!) · 4f7877ca
  NADAL Morgane authored 5 years ago
  
  4f7877ca
- last modif to ToPixel (usable for dist, area, volume) · 54fbde26
  NADAL Morgane authored 5 years ago
  
  54fbde26
- doc for ToPixel (only dist and area - not volume) · ed5bd077
  NADAL Morgane authored 5 years ago
  
  ed5bd077
- corrected error in ToPixel · 87d5683e
  NADAL Morgane authored 5 years ago
  
  87d5683e
Mar 17, 2020
- dealt with parameters issues (pixel-micron + arguments in fct) + some refactoring · d84ad67e
  NADAL Morgane authored 5 years ago
  
  d84ad67e
Mar 16, 2020
- created parameters.ini file (todo: clean up) + still working on PySide2 for ImageVerification() · e82a6e87
  NADAL Morgane authored 5 years ago
  
  e82a6e87
Mar 13, 2020
- refactoring · 56c71b36
  NADAL Morgane authored 5 years ago
  
  56c71b36
- modif FindVoxelDimensionInMicrons() w/ re expression + try-except · 3b79f558
  NADAL Morgane authored 5 years ago
  
  3b79f558
- modif IntensityNormalizedImage() · 0aa2d768
  NADAL Morgane authored 5 years ago
  
  0aa2d768
- modif ImageVerification() -> no image constant + some changes in the dimension verif · 4321a9bd
  NADAL Morgane authored 5 years ago
  
  4321a9bd
Mar 11, 2020
- modified selem (in micron) in prms + in other fcts · c753b56b
  NADAL Morgane authored 5 years ago
  
  c753b56b
- fct for intensity normalization and find voxel dimension in micron + refractoring · a7220a24
  NADAL Morgane authored 5 years ago
  
  a7220a24
Mar 10, 2020
- wrote fct for relative intensity image normalization + refractoring · baae4068
  NADAL Morgane authored 5 years ago
  
  baae4068
Mar 09, 2020
- Added the dijkstra and frangi algo (not the link). · 7745e79b
  NADAL Morgane authored 5 years ago
  
  Added an algorithm for the verification for image dimension and coherence with the parameter channel. No user interface yet because of a bug in PySide2.
  7745e79b
- added Morgane as contributor · d1519363
  DEBREUVE Eric authored 5 years ago
  
  d1519363
Mar 06, 2020
- recfactoring · 2e524b41
  DEBREUVE Eric authored 5 years ago
  
  2e524b41
Feb 26, 2020
- some refactoring · 3fbfbea8
  DEBREUVE Eric authored 5 years ago
  
  3fbfbea8
Dec 13, 2019
- reorg + preliminary c-based frangi · 3b8c5fc0
  DEBREUVE Eric authored 5 years ago
  
  3b8c5fc0
Oct 15, 2019
- added licence · 83da42da
  DEBREUVE Eric authored 5 years ago
  
  83da42da
Oct 01, 2019
- added notation file · 249c17f4
  DEBREUVE Eric authored 5 years ago
  
  249c17f4
Aug 29, 2019
- Initial commit · 4efb1d4c
  DEBREUVE Eric authored 5 years ago
  
  4efb1d4c