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  • #2666
Closed
Open
Created Sep 25, 2017 by Mathieu Giraud@magiraudOwner

e-valeur de SEG_METHOD_MAX1U et index_load de AFFECT_UNKNOWN

Le test de chimera-fake-half.should-get qui ne passe pas dans !79 (alors que !79 est bon dans l'esprit) révèle que les e-valeurs de SEG_METHOD_MAX1U sont mal calculées (et donc on en a très peu souvent).

Séquence :

>TRGV1*01--cgcg
tcttccaacttggaagggagaacgaagtcagtcaccaggctgactgggtcatctgctgaa
cgcgcgcgcgcgcgcgcgcgcgcgcgcgcgcgcgcgcgcg

Affects :

#   6 - VJ 	1 59 88 100	 seed IGK SEG_- 2.526646e+01 2.452207e+01/7.443986e-01 _ _-k ? _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _+K _ _ _ _ _ _ _ _ _ _ _ _-K-K-K-K _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _

#  49 !  seed TRG UNSEG ambiguous 9.600000e+01 2.122587e-92/9.600000e+01+G+G+G ?+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G+G _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _

IGK par chance (avec !79, et encore, e-value pourrie), mais ici c'est clairement un MAX1U qui doit passer (et plus que SEG_METHOD_ONE #1724 (closed)). Voir aussi #2655.

Edited Sep 25, 2017 by Mathieu Giraud
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