benchs:

  - ensure to reserve all the bora node with all the cores using --exclusive
  - ensure to not be binded to a single core using HFI_NO_CPUAFFINITY=1
  - update input parameters for the experiments

scripts/bench-time-seq.sh

 #!/usr/bin/env bash
 
+export HFI_NO_CPUAFFINITY=1
+
 suffix="$1"
 
 # configuration and compilation
@@ -10,15 +12,15 @@ cmake --build "${build_dir}" --target fmm-computation-seq
 exec_file="${build_dir}/bench/Release/fmm-computation-seq"
 
 # changing parameters
+dimension=(1 2 3)
 order_values=(5)
 interp_settings_values=(1 2 4)
-size_values=(1000 5000 10000 50000 100000) # 500000 1000000)
+size_values=(1000 5000 10000 50000 100000 500000 1000000)
 tree_height_values=(3 4 5)
 kernel_values=(0)
 
 # fixed parameters
 log_file="tmp-log-buffer.txt"
-dimension=2
 nb_threads=1  # fully sequential !
 group_size=1
 nb_runs=5

scripts/bench-time-task-dep.sh

 #!/usr/bin/env bash
 
+export HFI_NO_CPUAFFINITY=1
+
 suffix="$1"
 
 # configuration and compilation
@@ -10,13 +12,13 @@ cmake --build "${build_dir}" --target fmm-computation-omp
 exec_file="${build_dir}/bench/Release/fmm-computation-omp"
 
 # changing parameters
+dimension=(1 2 3)
 nb_threads_values=(1 2 4 8 16)
-group_size_values=(1 5 10 50 100)
+group_size_values=(1 5 10 100 1000)
 tree_height_values=(3 4 5)
 
 # fixed parameters
 log_file="tmp-log-buffer.txt"
-dimension=2
 kernel=0
 order=5
 nb_runs=5

scripts/experiment-bora-accuracy.slurm

 #!/usr/bin/env bash
 #SBATCH --job-name=experiment-bora-accuracy
 #SBATCH --nodes=1
+#SBATCH --exclusive
 #SBATCH --time=3:00:00
 #SBATCH -C "bora"
 #SBATCH --output=out-experiment-bora-accuracy-%j.txt

scripts/experiment-bora-bench-time-seq.slurm

 #!/usr/bin/env bash
 #SBATCH --job-name=experiment-bora-bench-time-seq
 #SBATCH --nodes=1
+#SBATCH --exclusive
 #SBATCH --time=3:00:00
 #SBATCH -C "bora"
 #SBATCH --output=out-experiment-bora-bench-time-seq-%j.txt

scripts/experiment-bora-bench-time-task-dep.slurm

 #!/usr/bin/env bash
 #SBATCH --job-name=experiment-bora-bench-time-task-dep
 #SBATCH --nodes=1
+#SBATCH --exclusive
 #SBATCH --time=3:00:00
 #SBATCH -C "bora"
 #SBATCH --output=out-experiment-bora-bench-time-task-dep-%j.txt

scripts/test-accuracy.sh

 #!/usr/bin/env bash
 
+export HFI_NO_CPUAFFINITY=1
+
 suffix="$1"
 
 # configuration and compilation
@@ -10,15 +12,15 @@ cmake --build "${build_dir}" --target fmm-computation-seq
 exec_file="${build_dir}/bench/Release/fmm-computation-seq"
 
 # changing parameters
+dimension=(1 2 3)
 order_values=(3 4 5 6 7 8 9 10 11 12)
+tree_height=(3 4 5)
 interp_settings_values=(0 1 2 3 4)
 kernel_values=(0 6 7)
 
 # fixed parameters
 log_file="tmp-log-buffer.txt"
 input_file="data/cuboid11-dim2-in-val1-center00-N10000.fma"
-dimension=2
-tree_height=4
 group_size=1
 nb_threads=4  # for direct computation
 nb_runs=1