Commits · 222b14a62fa2afc4ab3173bb15bf6100d51c0c21 · DEBREUVE Eric / NutriMorph

Feb 17, 2023
- soma node creation correction (wip) · 222b14a6
  DEBREUVE Eric authored 2 years ago
  
  222b14a6
- reformatting + reverting some bad simplifications · 40d6674e
  DEBREUVE Eric authored 2 years ago
  
  40d6674e
Feb 16, 2023
- some Python problems (pycharm detected) corrected · f099b1db
  DEBREUVE Eric authored 2 years ago
  
  f099b1db
- after .git retrieval · 47d23ced
  DEBREUVE Eric authored 2 years ago
  
  47d23ced
May 18, 2021
- added auto memory profiling code · 8de2b0b9
  DEBREUVE Eric authored 3 years ago
  
  8de2b0b9
May 11, 2021
- 2 path creation corrections (more to do) · 4bd77027
  DEBREUVE Eric authored 3 years ago
  
  4bd77027
Apr 12, 2021
- refactoring + added label toggling · 1132345c
  DEBREUVE Eric authored 3 years ago
  
  1132345c
Apr 07, 2021
- large refactoring · 25ebe576
  DEBREUVE Eric authored 3 years ago
  
  25ebe576
Apr 06, 2021
- 2d mips on axes panes · 0b5b5522
  DEBREUVE Eric authored 3 years ago
  
  0b5b5522
Apr 02, 2021
- attempt to add 2D slice in 3D view · 2dc6febc
  DEBREUVE Eric authored 3 years ago
  
  2dc6febc
Mar 22, 2021
- added gfp image · f1671d52
  DEBREUVE Eric authored 4 years ago
  
  f1671d52
Mar 16, 2021
- added matplotlib colormap-based mip coloring · 6f5f04c4
  DEBREUVE Eric authored 4 years ago
  
  6f5f04c4
- large refactoring · 3f530135
  DEBREUVE Eric authored 4 years ago
  
  3f530135
Mar 12, 2021
- refactored soma validation interface + color · 1f68b7fd
  DEBREUVE Eric authored 4 years ago
  
  1f68b7fd
Mar 11, 2021
- added basic soma validation interface · 1b41ed0e
  DEBREUVE Eric authored 4 years ago
  
  1b41ed0e
Feb 03, 2021
- adaptation to local env · 2e57a10e
  DEBREUVE Eric authored 4 years ago
  
  2e57a10e
Jul 23, 2020
- small corrections · 6c2466b6
  NADAL Morgane authored 4 years ago
  
  6c2466b6
Jul 06, 2020
- improved features_analysis.py and add new parameter to nutrimorph.py · 7b24a676
  NADAL Morgane authored 4 years ago
  
  7b24a676
Jul 03, 2020
- usable version of dilatation/erosion during connexion of extensions · 44e96ffb
  NADAL Morgane authored 4 years ago
  
  44e96ffb
Jul 01, 2020
- dvpt of algo helping feature selection · e1cccbf8
  NADAL Morgane authored 4 years ago
  
  e1cccbf8
Jun 30, 2020
- small correction to delete NaN in pd df · 98cd4399
  NADAL Morgane authored 4 years ago
  
  98cd4399
Jun 29, 2020
- usable version with choice btw w or wo dilatation/erosion. · df243383
  NADAL Morgane authored 4 years ago
  
  For the moment, more relevant results (biologically speaking) without dilatation/erosion.
  df243383
Jun 26, 2020

EROSION/DILATATION during connexion: added possibility to choose between 2... · c5b6acb2

NADAL Morgane authored 4 years ago

EROSION/DILATATION during connexion: added possibility to choose between 2 erosion conditions. The strict one seems to be best (strict_erosion=True)

c5b6acb2

Jun 25, 2020
- solved EROSION/DILATATION bug · 1e026ed9
  NADAL Morgane authored 4 years ago
  
  1e026ed9
Jun 24, 2020
- modif · 685f23fe
  NADAL Morgane authored 4 years ago
  
  685f23fe
- some modifs + new prms · 4e8095db
  NADAL Morgane authored 4 years ago
  
  4e8095db
Jun 23, 2020
- minor modifications · 2b2747d4
  NADAL Morgane authored 4 years ago
  
  2b2747d4
- improve interface & prms · 2a162674
  NADAL Morgane authored 4 years ago
  
  2a162674
- add try/except for better dvpt · ae39797d
  NADAL Morgane authored 4 years ago
  
  ae39797d
Jun 22, 2020

solved BIG BUG: tangency of extensions and connexions leading to... · 9f4cdf48

NADAL Morgane authored 4 years ago

solved BIG BUG: tangency of extensions and connexions leading to "deskeletonization" and sklgraph incoherence with python objects

9f4cdf48

Jun 17, 2020
- solved BUG: free ext in cell graph · 0ac4c20d
  NADAL Morgane authored 4 years ago
  
  0ac4c20d
Jun 12, 2020
- Format update: NutriMorph can be run on a file or on multiple files within repositories · 62d76ae3
  NADAL Morgane authored 4 years ago
  
  62d76ae3
- update: prm differenciation mode in frangi --> indirect · 5256359b
  NADAL Morgane authored 4 years ago
  
  5256359b
- update: thinning after skeletonization in nutrimorph.py and skl_map.py · 986ed789
  NADAL Morgane authored 4 years ago
  
  986ed789
- small correction · 40ccd520
  NADAL Morgane authored 4 years ago
  
  40ccd520
Jun 11, 2020
- Annotated the whole Nutrimorph script, except specific fcts in Frangi, Dijkstra and SKLGraph. · d4054214
  NADAL Morgane authored 4 years ago
  
  d4054214
Jun 08, 2020
- some modifs · 4cadf915
  NADAL Morgane authored 4 years ago
  
  4cadf915
- delete too big somas · 5a3fbfdc
  NADAL Morgane authored 4 years ago
  
  + under dev: delete too big extensions
  5a3fbfdc
Jun 05, 2020
- solved hysteresis bug - still in dvpt · c7b23f47
  NADAL Morgane authored 4 years ago
  
  c7b23f47
- working on hysteresis bug · 4a5d39df
  NADAL Morgane authored 4 years ago
  
  4a5d39df