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DEBREUVE Eric
NutriMorph
Commits
110f487c
Commit
110f487c
authored
5 years ago
by
NADAL Morgane
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created parameters.ini file (todo: clean up) + still working on PySide2 for ImageVerification()
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110f487c
# Copyright CNRS/Inria/UNS
# Contributor(s): Eric Debreuve (since 2019), Morgane Nadal (2020)
#
# eric.debreuve@cnrs.fr
#
# This software is governed by the CeCILL license under French law and
# abiding by the rules of distribution of free software. You can use,
# modify and/ or redistribute the software under the terms of the CeCILL
# license as circulated by CEA, CNRS and INRIA at the following URL
# "http://www.cecill.info".
#
# As a counterpart to the access to the source code and rights to copy,
# modify and redistribute granted by the license, users are provided only
# with a limited warranty and the software's author, the holder of the
# economic rights, and the successive licensors have only limited
# liability.
#
# In this respect, the user's attention is drawn to the risks associated
# with loading, using, modifying and/or developing or reproducing the
# software by the user in light of its specific status of free software,
# that may mean that it is complicated to manipulate, and that also
# therefore means that it is reserved for developers and experienced
# professionals having in-depth computer knowledge. Users are therefore
# encouraged to load and test the software's suitability as regards their
# requirements in conditions enabling the security of their systems and/or
# data to be ensured and, more generally, to use and operate it in the
# same conditions as regards security.
#
# The fact that you are presently reading this means that you have had
# knowledge of the CeCILL license and that you accept its terms.
[Input]
data_path:
"./data/DIO_6H_6_1.70bis_2.2_3.tif"
channel:
'G'
size_voxel_in_micron:
None
# -> list [X,Y,Z]
[Somas]
soma_low_c:
0.15
soma_high_c:
0.7126
soma_selem_micron_c:
0.48100048
# soma_selem_c = mp_.disk(2)
soma_min_area_c:
1000
[Extensions]
ext_low_c:
0.2
# 0.02 # 0.2 # ext_low_c = 9.0e-4
ext_high_c:
0.6
# 0.04 # 0.6 # high_ext = 8.0e-3
ext_selem_micron_c:
0.24050024
# ext_selem_c = mp_.disk(1) /!\ Not directly used in brick/component #TODO direct use of param ?
ext_min_area_c:
100
# /!\ Not directly used in brick/component #TODO direct use of param ?
[Connexions]
max_straight_sq_dist_c:
30
**
2
max_weighted_length_c:
20.0
[Program Running]
with_plot:
True
in_parallel:
False
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