diff --git a/parameters.ini b/parameters.ini new file mode 100644 index 0000000000000000000000000000000000000000..abd635a835ca71f3cae12f7783fa6ed7a8a52fd3 --- /dev/null +++ b/parameters.ini @@ -0,0 +1,62 @@ +# Copyright CNRS/Inria/UNS +# Contributor(s): Eric Debreuve (since 2019), Morgane Nadal (2020) +# +# eric.debreuve@cnrs.fr +# +# This software is governed by the CeCILL license under French law and +# abiding by the rules of distribution of free software. You can use, +# modify and/ or redistribute the software under the terms of the CeCILL +# license as circulated by CEA, CNRS and INRIA at the following URL +# "http://www.cecill.info". +# +# As a counterpart to the access to the source code and rights to copy, +# modify and redistribute granted by the license, users are provided only +# with a limited warranty and the software's author, the holder of the +# economic rights, and the successive licensors have only limited +# liability. +# +# In this respect, the user's attention is drawn to the risks associated +# with loading, using, modifying and/or developing or reproducing the +# software by the user in light of its specific status of free software, +# that may mean that it is complicated to manipulate, and that also +# therefore means that it is reserved for developers and experienced +# professionals having in-depth computer knowledge. Users are therefore +# encouraged to load and test the software's suitability as regards their +# requirements in conditions enabling the security of their systems and/or +# data to be ensured and, more generally, to use and operate it in the +# same conditions as regards security. +# +# The fact that you are presently reading this means that you have had +# knowledge of the CeCILL license and that you accept its terms. + + +[Input] +data_path: "./data/DIO_6H_6_1.70bis_2.2_3.tif" +channel: 'G' +size_voxel_in_micron: None +# -> list [X,Y,Z] + +[Somas] +soma_low_c: 0.15 +soma_high_c: 0.7126 +soma_selem_micron_c: 0.48100048 +# soma_selem_c = mp_.disk(2) +soma_min_area_c: 1000 + +[Extensions] +ext_low_c: 0.2 +# 0.02 # 0.2 # ext_low_c = 9.0e-4 +ext_high_c: 0.6 +# 0.04 # 0.6 # high_ext = 8.0e-3 +ext_selem_micron_c: 0.24050024 +# ext_selem_c = mp_.disk(1) /!\ Not directly used in brick/component #TODO direct use of param ? +ext_min_area_c: 100 +# /!\ Not directly used in brick/component #TODO direct use of param ? + +[Connexions] +max_straight_sq_dist_c: 30 ** 2 +max_weighted_length_c: 20.0 + +[Program Running] +with_plot: True +in_parallel: False