parameters.ini

# Copyright CNRS/Inria/UNS
# Contributor(s): Eric Debreuve (since 2019), Morgane Nadal (2020)
#
# eric.debreuve@cnrs.fr
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# TODO: Use the .ini file instead of the .py file - configparser
[Input]
data_path                  :    ./data/DIO_6H_6_1.70bis_2.2_3.tif
channel                    :    G
size_voxel_in_micron
# size_voxel_in_micron ->  X,Y,Z

[Somas]
soma_low_c                 :    0.15
soma_high_c                :    0.7126
soma_selem_micron_c        :    0.24050024 * 2
soma_min_area_c            :    (0.24050024 ** 2) * 1000

[Extensions]
ext_low_c                  :    0.2
# 0.02  # 0.2  # 9.0e-4
ext_high_c                 :    0.6
# 0.04  # 0.6  # 8.0e-3
ext_selem_micron_c         :    0.24050024 * 1
ext_min_area_c             :    (0.24050024 ** 2) * 100

[Connexions]
max_straight_sq_dist_c     :    0.24050024 * (30 ** 2)
max_weighted_length_c      :    0.24050024 * 20.0

[Program Running]
with_plot                  :    False
in_parallel                :    False