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Makefile Loading commit data...
affectanalyser.cpp Loading commit data...
affectanalyser.h Loading commit data...
automaton.h Loading commit data...
automaton.hpp Loading commit data...
bam.cpp Loading commit data...
bam.h Loading commit data...
bioreader.cpp Loading commit data...
bioreader.hpp Loading commit data...
check-compiler.h Loading commit data...
cluster-junctions.cpp Loading commit data...
cluster-junctions.h Loading commit data...
compare-all.cpp Loading commit data...
compare-all.h Loading commit data...
dynprog.cpp Loading commit data...
dynprog.h Loading commit data...
fasta.cpp Loading commit data...
fasta.h Loading commit data...
filter.cpp Loading commit data...
filter.h Loading commit data...
germline.cpp Loading commit data...
germline.h Loading commit data...
json.cpp Loading commit data...
json.h Loading commit data...
kmeraffect.cpp Loading commit data...
kmeraffect.h Loading commit data...
kmerstore.cpp Loading commit data...
kmerstore.h Loading commit data...
kmerstorefactory.hpp Loading commit data...
labels.cpp Loading commit data...
labels.h Loading commit data...
lazy_msa.cpp Loading commit data...
lazy_msa.h Loading commit data...
list_utils.h Loading commit data...
math.cpp Loading commit data...
math.hpp Loading commit data...
mkdir.cpp Loading commit data...
mkdir.h Loading commit data...
output.cpp Loading commit data...
output.h Loading commit data...
read_chooser.cpp Loading commit data...
read_chooser.h Loading commit data...
read_score.cpp Loading commit data...
read_score.h Loading commit data...
read_storage.cpp Loading commit data...
read_storage.h Loading commit data...
representative.cpp Loading commit data...
representative.h Loading commit data...
segment.cpp Loading commit data...
segment.h Loading commit data...
sequenceSampler.cpp Loading commit data...
sequenceSampler.h Loading commit data...
similarityMatrix.cpp Loading commit data...
similarityMatrix.h Loading commit data...
stats.cpp Loading commit data...
stats.h Loading commit data...
tools.cpp Loading commit data...
tools.h Loading commit data...
windowExtractor.cpp Loading commit data...
windowExtractor.h Loading commit data...
windows.cpp Loading commit data...
windows.h Loading commit data...