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vidjil
vidjil
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Mise à jour terminée. Pour connaître les apports de la version 13.8.4 par rapport à notre ancienne version vous pouvez lire les "Release Notes" suivantes :
https://about.gitlab.com/releases/2021/02/11/security-release-gitlab-13-8-4-released/
https://about.gitlab.com/releases/2021/02/05/gitlab-13-8-3-released/

  • vidjil
  • vidjilvidjil
  • Milestones
  • Algo 2017.03

Closed
Milestone

Algo 2017.03

2017-03-14  The Vidjil Team
        * Better support for germlines from several species (germlines/*.g) #1987 #2132
        * Streamlined option -g, including filtering, removed old -i/-G options (vidjil.cpp, core/germline.cpp) #2134
        * Better productivity estimation, handling in-frame stop codons (core/segment.cpp) #2220
        * Better unsegmentation causes, 'UNSEG only V/J' needs really significant V/J fragments (core/segment.cpp) #2107
        * New experimental faster heuristic with Aho-Corasick automaton (core/automaton.hpp) #1366
        * New option to disable window clustering (-w all) (core/windowExtractor.cpp) #1642
        * Updated germline genes from IMGT/GENE-DB
        * Bugs closed (json output, consensus computation, -y option) #2214 #2217 #2224 #2239
        * Refactored test structure for should-vdj tests (tests/should-vdj-to-tap.py, tests/repseq_vdj.py)
        * New and updated unit and functional tests, including more solved former bugs
        * Moved code to gitlab, better project management, commit messages are now linked to issues
  • Issues 18
  • Merge Requests 1
  • Participants 2
  • Labels 34
100% complete
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18
Issues 18 New issue
Open: 0 Closed: 18
1
Merge requests 1
Open: 0 Closed: 0 Merged: 1
0
Releases
None
Reference: vidjil/vidjil%"Algo 2017.03"