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  • #2178

Closed
Open
Opened Feb 14, 2017 by Mathieu Giraud@magiraudOwner

'syntax error near unexpected token' lors d'un should-vdj

python should-vdj-to-tap.py should-vdj-tests/trd-dd2-dd3.should-vdj.fa
(...)
ok 4 # TODO #! ok - TRDD2*01 0//0 TRDD3*01    TODO
sh: -c: line 0: syntax error near unexpected token `('
sh: -c: line 0: `echo '>TRDV3*01_0//0_TRDD3*01  [TRD+]  TODO !  @50  @45  TRD UNSEG only V/5\' 1.043438e+01 1.174069e-25/1.043438e+01 ' | grep -E 'TRDV3[*]01.*0//0.*TRDD3[*]01.*!([*][[:digit:]]*)?.*@50([*][[:digit:]]*)?.*@45([*][[:digit:]]*)?.*TRD([*][[:digit:]]*)?.*UNSEG([*][[:digit:]]*)?.*only([*][[:digit:]]*)?.*V/5\'([*][[:digit:]]*)?.*1.043438e+01([*][[:digit:]]*)?.*1.174069e-25/1.043438e+0([*][[:digit:]]*)?' > /dev/null 2>&1'

cc @mikael-s

To upload designs, you'll need to enable LFS and have admin enable hashed storage. More information
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Reference: vidjil/vidjil#2178