Looks even better

.gitignore

@@ -13,14 +13,12 @@
 *.snm
 *.vrb
 *.pdf
-!styles/**/*.pdf
 *.html
 *.json
-svg-inkscape
-_minted*
-figures/*.svg
-public/figures/*
+*.600pk
+figures/*.pdf
 *.csv
+*.el
 
 # Tangled source code
 *.sh

references.bib

-@misc{testFEMBEM,
+@misc{minisolver,
   title        = {
-    {test\_FEMBEM, a simple application for testing dense and sparse solvers
-    with pseudo-FEM or pseudo-BEM matrices}
+    {minisolver, a simple application for testing dense solvers with pseudo-BEM
+    matrices. It is based on the test\_FEMBEM application, however with just
+    enough functionalities for the needs of the Org mode and Guix tutorial.}
   },
-  howpublished = {\url{https://gitlab.inria.fr/solverstack/test_fembem}}
+  howpublished = {
+    \url{https://gitlab.inria.fr/tutorial-guix-hpc-workshop/software/minisolver}
+  }
 }
 
 @misc{hmat-oss,

study.org

@@ -23,12 +23,12 @@ application, developed especially for the needs of this study.
 :CUSTOM_ID: model-software
 :END:
 
-=minisolver= considers a simplified aeroacoustic =cylinder= model represented by
-a linear system. It is then able to generate test cases of arbitrarily large
-sizes in terms of the unknown count in the corresponding linear system. Finally,
-=minisolve= uses the open-source HMAT solver [cite:@hmat-oss;Lize14] for solving
-the generated linear system and actually compute the acoustic pressure in
-different parts of the model.
+=minisolver= [cite:@minisolver] considers a simplified aeroacoustic =cylinder=
+model represented by a linear system. It is then able to generate test cases of
+arbitrarily large sizes in terms of the unknown count in the corresponding
+linear system. Finally, =minisolve= uses the open-source HMAT solver
+[cite:@hmat-oss;@Lize14] for solving the generated linear system and actually
+compute the acoustic pressure in different parts of the model.
 
 #+CAPTION: A =cylinder= mesh counting 20,000 vertices.
 #+NAME: short-pipe
@@ -99,7 +99,7 @@ approach is to associate source code with an explanation of its purpose written
 in a natural language.
 
 There are numerous software tools designed for literate programming. We rely on
-Org mode for Emacs [cite:@Dominik18;emacs] which defines the Org markup language
+Org mode for Emacs [cite:@Dominik18;@emacs] which defines the Org markup language
 allowing to combine formatted text, images and figures with traditional source
 code. Files containing documents written in Org mode should end with the =.org=
 extension.
@@ -162,9 +162,9 @@ explanation.
 
 #+BEGIN_SRC shell
 guix time-machine -C channels.scm -- shell --pure -m manifest.scm -- \
-     ./results-time.R
+     Rscript ./results-time.R
 guix time-machine -C channels.scm -- shell --pure -m manifest.scm -- \
-     ./results-ram.R
+     Rscript ./results-ram.R
 #+END_SRC
 
 **** Publishing manuscripts
@@ -297,9 +297,8 @@ together with the =ggplot2= plotting library.
    "r-ggplot2"
 #+END_SRC
 
-For editing Org mode files and publishing them into HTML and PDF, we need some
-Emacs and Texlive packages as well as =inkscape= for manipulating scalable
-vector graphics.
+For editing Org mode files and publishing them into PDF, we need some
+Emacs and Texlive packages.
 
 #+BEGIN_SRC scheme
    "emacs"
@@ -307,19 +306,17 @@ vector graphics.
    "emacs-org-ref"
    "emacs-ess"
    "texlive-scheme-basic"
-       "texlive-hyperref"
-       "texlive-geometry"
-       "texlive-ec"
-       "texlive-float"
-"texlive-latexmk"
-"texlive-wrapfig"
-"texlive-amsmath"
-"texlive-ulem"
-"texlive-capt-of"
-"texlive-biblatex"
-"texlive-biber"
-       "sed"
-   "inkscape"
+   "texlive-hyperref"
+   "texlive-geometry"
+   "texlive-ec"
+   "texlive-float"
+   "texlive-latexmk"
+   "texlive-wrapfig"
+   "texlive-amsmath"
+   "texlive-ulem"
+   "texlive-capt-of"
+   "texlive-biblatex"
+   "texlive-biber"
 #+END_SRC
 
 Eventually, we also include =bash= together with other system utilities,
@@ -327,6 +324,7 @@ especially for gathering the machine info in the bash script defined in Section.
 
 #+BEGIN_SRC scheme
    "bash"
+   "sed"
    "coreutils"))
 #+END_SRC
 
@@ -337,11 +335,11 @@ especially for gathering the machine info in the bash script defined in Section.
 
 We benchmark =minisolver= on linear systems with $N$, the number of unknowns,
 in (5,000; 10,000; 15,000; 20,000) while consider either the /low/ or the /high/
-# compression level. Table [[benchmarks-table]] lists all of the considered
+compression level. Table [[benchmarks-table]] lists all of the considered
 benchmarks.
 
 #+NAME: get-table
-#+begin_src elisp :noweb yes :exports none
+#+begin_src elisp :noweb yes :exports results :results value raw
 <<get-table-of-benchmarks>>
 #+end_src
 
@@ -566,7 +564,7 @@ At the very end of the script, we produce the plot into a =*.svg= file while
 specifying the destination as well as the initial dimensions.
 
 #+begin_src R
-ggsave(file = "figures/results-time.pdf", plot = plot, width = 5, height = 5)
+ggsave(file = "figures/results-time.pdf", plot = plot, width = 5, height = 3)
 #+end_src
 
 *** Peak RAM usage
@@ -624,7 +622,7 @@ theme_bw()
 The destination file name changes too, of course.
 
 #+begin_src R
-ggsave(file = "figures/results-ram.pdf", plot = plot, width = 5, height = 5)
+ggsave(file = "figures/results-ram.pdf", plot = plot, width = 5, height = 3)
 #+end_src
 
 * Conclusion
@@ -698,27 +696,6 @@ For the bibliography to be exported correctly to PDF, we need to use the
 (setq org-cite-export-processors '((t biblatex)))
 #+end_src
 
-For a nice formatting of source code blocks, we choose the =minted= package with
-a custom appearance configuration.
-
-#+begin_src elisp
-(setq org-latex-packages-alist '())
-;;(add-to-list 'org-latex-packages-alist '("" "minted"))
-;;(setq org-latex-listings 'minted)
-;;(setq org-latex-minted-options
-;;        '(("linenos = false") ("mathescape") ("breaklines")
-;;          ("style = monokai")))
-#+end_src
-
-The export to a LaTeX PDF triggers the inclusion of a certain number of LaTeX
-packages by default. However, we need to include an extra package, i.e. the
-=svg= package, allowing us to use =*.svg= files in the manuscript.
-
-#+begin_src elisp
-;;(add-to-list 'org-latex-packages-alist
-;;             '("inkscapelatex = false, inkscapearea = page" "svg"))
-#+end_src
-
 Eventually, we set up a list of publishing targets. Here, we have a single
 target consisting in publishing all of the Org files in the current working
 directory. In our case, it concerns only the present Org source. The attributes