Reduce the output to relevant transfers only
Current behavior
Some metabolites transferred by powernodes are actually not useful for the production of targets. This happens for toys already, so at the genome-scale it creates noise in the analysis.
Expected behavior
Provide only the transfers between pairs of powernodes if they are useful for the targets
Actions
-
Create a simple example with 3 powernodes and 5 bacteria, as used by @cghassem in her seminars. -
Use an alternate ASP model where the core of the transfers between bacteria is the relevance wrt the production of targets. -
Permit the generation of a lp instance with all minimal community compositions
Edited by Clémence Frioux