Commits · develop · MOSAIC / timagetk · GitLab

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Oct 24, 2025
- Update multichannel handling in `multiangle_fusion.py` · 1712d1cc
  PETIT Manuel authored Oct 24, 2025
  1712d1cc
- Refactor file handling in `dataset_creation.py` · feae0184
  PETIT Manuel authored Oct 24, 2025
  feae0184
Oct 19, 2025
- Fix an issue with transformation matrix handling in `PreprocessingGUI` · a5c21e70
  PETIT Manuel authored Oct 19, 2025
  
  a5c21e70
- Add `tissue_image_surface_polydata` function for outer tissue surface extraction · 9ac3c445
  PETIT Manuel authored Oct 19, 2025
  9ac3c445
- Refactor opacity handling in `ImageViewer` · 8fb68b99
  PETIT Manuel authored Oct 19, 2025
  8fb68b99
- Refactor colormap and opacity handling in `PreprocessingGUI` · 0f8c329d
  PETIT Manuel authored Oct 19, 2025
  0f8c329d
- Decorate `to_uint8` function with `@multichannel_wrapper` to enable multichannel support. · 192e37b4
  PETIT Manuel authored Oct 19, 2025
  
  192e37b4
Oct 18, 2025
- Rename `--dataset` argument to `--intensity_dataset` in `multiangle_fusion.py`... · 02aa0e0e
  PETIT Manuel authored Oct 18, 2025
  02aa0e0e
- Update help text for `--channel` and `--view` arguments in preprocessing script · bb73c9bc
  PETIT Manuel authored Oct 18, 2025
  
  bb73c9bc
- Merge branch 'feature/gui-preprocessing-multichannel' into develop · 8f4c2a89
  PETIT Manuel authored Oct 18, 2025
  
  8f4c2a89
- Refactor `PreprocessingGUI` to separate PyVista and output conventions · 312e34ec
  PETIT Manuel authored Oct 18, 2025
  312e34ec
- Enhance `PreprocessingGUI` with advanced visualization controls · 5dd69812
  PETIT Manuel authored Oct 18, 2025
  5dd69812
- Merge remote-tracking branch 'origin/develop' into feature/gui-preprocessing-multichannel · 6922a6b2
  PETIT Manuel authored Oct 18, 2025
  
  6922a6b2
- Merge branch 'feature/image-viewer-enhancement' into develop · cf9b9c83
  PETIT Manuel authored Oct 18, 2025
  
  cf9b9c83
- Add `slice_image` function for 2D slicing of 3D SpatialImages · ee2e703c
  PETIT Manuel authored Oct 18, 2025
  ee2e703c
- Update `ImageViewerGUI` with detailed documentation and improved functionality · b4064f09
  PETIT Manuel authored Oct 18, 2025
  b4064f09
- Refactor `ImageViewerGUI` clipping and slicing logic · 1675658e
  PETIT Manuel authored Oct 18, 2025
  1675658e
- Refactor `ImageViewerGUI` for image handling · d7b93753
  PETIT Manuel authored Oct 18, 2025
  d7b93753
Oct 17, 2025
- Move utils class & function for `tkinter` in a specific python file `utils`. · 246028f0
  PETIT Manuel authored Oct 17, 2025
  
  246028f0
- Enhance `opacity_func` to add support for sigmoid transfer function · 67c8001e
  PETIT Manuel authored Oct 17, 2025
  
  67c8001e
- Remove import to `PseudoButton` and `_is_number`. · 49c11fc3
  PETIT Manuel authored Oct 17, 2025
  
  49c11fc3
Oct 16, 2025
- Add partial-support for multi-angle images in `preprocessing` CLI function. · 94b3aa28
  PETIT Manuel authored Oct 16, 2025
  94b3aa28
- Improve parameter parsing to help debug at higher level (CLI function) · 68c5226f
  PETIT Manuel authored Oct 16, 2025
  
  68c5226f
- `apply_trsf`: Do not create copy when converting the output vtImage to a SpatialImage · f22c17d2
  PETIT Manuel authored Oct 16, 2025
  
  f22c17d2
Oct 15, 2025
- Update the command line for the preprocessing task · d7ad5a57
  PETIT Manuel authored Oct 15, 2025
  
  d7ad5a57
- Improve docstrings · 29f2b794
  PETIT Manuel authored Oct 15, 2025
  
  29f2b794
- Improve the visibility of some buttons. · 2bb2fd30
  PETIT Manuel authored Oct 15, 2025
  
  2bb2fd30
- Add MultiChannelImage support to PreprocessingGUI · 6f89e749
  PETIT Manuel authored Oct 15, 2025
  6f89e749
- Add the method to crop MultiChannelImage. · 81edab3a
  PETIT Manuel authored Oct 15, 2025
  81edab3a
- Bump version to 3.2.0 · 4c92c6c6
  LEGRAND Jonathan authored Oct 15, 2025
  
  4c92c6c6
- Merge branch 'feature/graph-derivatives' into 'develop' · e017d00a
  LEGRAND Jonathan authored Oct 15, 2025
  e017d00a
- harmonize in-line comments for graph derivatives functions · e2bd33a5
  CERUTTI Guillaume authored Oct 15, 2025
  
  e2bd33a5
- Add comments to graph_analysis.py functions for clarity · 17b3bd3e
  LEGRAND Jonathan authored Oct 14, 2025 and LEGRAND Jonathan committed Oct 15, 2025
  
  17b3bd3e
- Add detailed inline comments to `compute_cell_normal_property` · 2dc78b68
  LEGRAND Jonathan authored Oct 14, 2025
  2dc78b68
- enable to use a cell wall property as a weight in graph derivatives · 3520d5d7
  CERUTTI Guillaume authored Aug 29, 2025 and LEGRAND Jonathan committed Oct 15, 2025
  
  3520d5d7
- amend epidermal cells test · 7c983444
  CERUTTI Guillaume authored Aug 28, 2025 and LEGRAND Jonathan committed Oct 15, 2025
  
  7c983444
- fix random seed in test · 5faa641a
  CERUTTI Guillaume authored Aug 28, 2025 and LEGRAND Jonathan committed Oct 15, 2025
  
  5faa641a
- add tests for graph derivative function · 62e375fa
  CERUTTI Guillaume authored Aug 28, 2025 and LEGRAND Jonathan committed Oct 15, 2025
  
  62e375fa
- add a function to estimate 1st and 2nd derivatives of a scalar property on a tissue graph · 9e7ff18a
  CERUTTI Guillaume authored Aug 28, 2025 and LEGRAND Jonathan committed Oct 15, 2025
  
  9e7ff18a
- make sure tissue_graph_from_image works on 2D tissues · 1424b44c
  CERUTTI Guillaume authored Aug 27, 2025 and LEGRAND Jonathan committed Oct 15, 2025
  
  1424b44c