- suppressed conn variable= use service.getConnection() instead
 - defined prepared queries
 - precompiled on the fly if used only once
 - incremented data base version to 490
 - systematic use of try-with-resources for ResultSet

- all logging through slf4j
- all command-line parameters through commons cli, duly tested

- edited copyright

- protected (quote) database assertions
- added initDatabase, resetDatabase and first updateDatabase
- rewrote all sql statements in uppercase
- added version attribute and stored in database
- added log in the database of the server and check it before reset
- added copyright notice for the RTSI snippet and JWhich

- Suppressed some 1.5 warnings
- Added a -S argument to AlignmentService and took the host argument into account

- Many small improvements of the AlignementServer
- Complete reengineering of the API for version 3.0

- solved user/pasword/database stuff

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