Mentions légales du service

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Commit 1867c2b5 authored by Jérôme Euzenat's avatar Jérôme Euzenat
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- Make plugin compile at shell level

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plugins/build.xml 0 → 100644
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View file @ 1867c2b5
<?xml version="1.0" encoding="iso-8859-1" ?>
<!-- $Id: build.xml 533 2007-08-04 09:38:07Z euzenat $ -->
<project name="align" default="compile" basedir=".">
<!-- tested -->
<target name="usage" depends="init">
<echo message="ant _target_ _options_"/>
<echo/>
<echo message="usage: this message"/>
<echo message="init: sets necessary variables"/>
<echo message="compile: incrementaly compiles sources"/>
<echo message="compileall: recompiles all sources"/>
<echo message="jar: archives compiled code"/>
<echo message="test: performs unit tests [nyi]"/>
<echo message="zip: creates a new zip file"/>
<echo message="javadoc: generates documentation"/>
<echo message="release: releases a new version"/>
<echo message="svnbranch: copy the version under svn"/>
<echo message="clean: clean-up before release"/>
<echo/>
<echo message=" -Dversion=${version}"/>
</target>
<!-- tested -->
<target name="init">
<tstamp><format locale="fr,fr" pattern="dd/MM/yyyy" property="TODAY"/></tstamp>
<property name="doing" value="running"/>
<property name="version" value="3.0"/>
<property name="date" value="${TODAY}"/>
<property name="login" value="euzenat"/>
<property name="email" value="Jerome.Euzenat@inrialpes.fr"/>
<property name="libdir" value="lib" />
<property name="debug" value="off"/>
<property name="rep" value="svn+ssh://scm.gforge.inria.fr/svn/alignapi"/>
<!-- This should now be handled by GForge -->
<property name="FTPDir" value="/Web/html/ftpexmo/software/ontoalign"/>
<property name="classpath" value="classes"/>
<filter token="DATE" value="${date}"/>
<filter token="VERS" value="${version}"/>
<path id="classpath">
<fileset dir="./lib">
<include name="*.jar"/>
</fileset>
<fileset dir="../lib">
<include name="align.jar"/>
<include name="procalign.jar"/>
</fileset>
</path>
</target>
<!-- tested -->
<target name="compile" depends="init">
<echo message="Compiling..."/>
<property name="javacargs" value="-deprecation" />
<javac deprecation="yes" nowarn="no" verbose="no" srcdir="src" destdir="classes">
<compilerarg value="${javacargs}"/>
<classpath refid="classpath"/>
</javac>
</target>
<!-- tested -->
<target name="compileall" depends="init">
<echo message="Erasing..."/>
<delete>
<fileset dir="classes" includes="**/*.class"/>
</delete>
<antcall target="compile"/>
</target>
<!-- tested -->
<target name="compilelint" depends="init">
<!-- values: all, deprecation, unchecked, fallthrough, path, serial, finally -->
<echo message="Setting property..."/>
<property name="javacargs" value="-Xlint:all" />
<antcall target="compileall"/>
</target>
<!-- tested -->
<target name="jar" depends="compile">
<echo message="Jarchiving..."/>
<copy file="distrib/LICENSE.TXT" tofile="classes/LICENSE.TXT" filtering="true"/>
<delete file="lib/align.jar"/>
<jar jarfile="lib/align.jar" manifest="distrib/MANIFEST.MF">
<fileset dir="classes" includes="org/semanticweb/owl/align/*.class"/>
<fileset dir="classes" includes="LICENSE.TXT"/>
</jar>
<delete file="lib/procalign.jar"/>
<jar jarfile="lib/procalign.jar" manifest="distrib/MANIFEST-pr.MF">
<fileset dir="classes" includes="org/ivml/**/*.class"/>
<fileset dir="classes" includes="fr/inrialpes/exmo/align/util/**/*.class"/>
<fileset dir="classes" includes="fr/inrialpes/exmo/align/parser/**/*.class"/>
<fileset dir="classes" includes="fr/inrialpes/exmo/align/impl/**/*.class"/>
<fileset dir="classes" includes="LICENSE.TXT"/>
</jar>
<delete file="lib/alignwn.jar"/>
<jar jarfile="lib/alignwn.jar" manifest="distrib/MANIFEST-wn.MF">
<fileset dir="classes" includes="fr/inrialpes/exmo/align/ling/**/*.class"/>
<fileset dir="classes" includes="LICENSE.TXT"/>
</jar>
<delete file="lib/alignsvc.jar"/>
<copy file="src/fr/inrialpes/exmo/align/service/aserv.wsdl" tofile="classes/fr/inrialpes/exmo/align/service/aserv.wsdl" filtering="false"/>
<jar jarfile="lib/alignsvc.jar" manifest="distrib/MANIFEST-svc.MF">
<fileset dir="classes" includes="fr/inrialpes/exmo/align/service/**/*.class"/>
<fileset dir="classes" includes="fr/inrialpes/exmo/align/service/**/*.wsdl"/>
<fileset dir="classes" includes="fr/inrialpes/exmo/queryprocessor/**/*.class"/>
<fileset dir="classes" includes="LICENSE.TXT"/>
</jar>
</target>
<!-- not tested -->
<target name="test" depends="init">
<echo message="Testing..."/>
<!-- <javac srcdir="test/fr/fluxmedia/transmorpher/graph/rules"
debug="on" destdir="classes">
<classpath refid="classpath"/>
</javac> -->
<javac srcdir="test/fr/fluxmedia/" debug="on" destdir="classes">
<classpath refid="classpath"/>
</javac>
<antcall target="jar"/>
<junit printsummary="yes" fork="yes" haltonfailure="no">
<batchtest todir="test/reports/xml/">
<fileset dir="classes/">
<include name="**/*Test.class"/>
<exclude name="**/Test.class"/>
</fileset>
<formatter type="xml"/>
</batchtest>
<classpath refid="classpath"/>
</junit>
<junitreport todir="test/reports">
<fileset dir="test/reports/xml/">
<include name="TEST-*.xml"/>
</fileset>
<report todir="test/reports/html/"/>
</junitreport>
</target>
<!-- tested -->
<target name="javadoc">
<echo message="Javadocing..."/>
<javadoc
sourcepath="src" destdir="javadoc"
packagenames="fr.inrialpes.*,org.semanticweb.owl.align.*,org.ivml.alimo.*"
Use="true" Splitindex="true" private="true"
Windowtitle="Ontology Alignment API"
Doctitle="alignmebr" Header="INRIA &amp; friends"
bottom="..no bottom yet..."
>
<!--link href="http://www.inrialpes.fr/exmo/local/doc/jdk1.3-doc/api"/>
<link href="http://www.inrialpes.fr/exmo/local/doc/xerces-doc/apiDocs"/>
<link href="http://www.inrialpes.fr/exmo/local/doc/xalan-doc/apidocs"/>
<link href="http://www.inrialpes.fr/exmo/local/doc/SAX2-doc/javadoc"/-->
</javadoc>
</target>
<!-- tested -->
<target name="release" depends="init">
<echo message="Releasing version ${version}" />
<copy file="distrib/README.TXT" tofile="README.TXT" filtering="true"/>
<copy file="distrib/LICENSE.TXT" tofile="LICENSE.TXT" filtering="true"/>
<antcall target="zip"/>
<!-- This should now go to GForge -->
<!--copy file="${FTPDir}/align-${version}.zip" tofile="${WebDir}/align.zip" /-->
<echo message="Please upload the released file to Gforge" />
<echo message="svn copy svn+ssh://euzenat@scm.gforge.inria.fr/svn/alignapi/trunk svn+ssh://euzenat@scm.gforge.inria.fr/svn/alignapi/tags/version-${version} -m 'release ${version}'"/>
<delete file="LICENSE.TXT"/>
</target>
<!-- tested -->
<target name="zip" depends="init">
<echo message="Ziping..."/>
<!--echo message="Are you sure that everything is OK (update/ci/compile)?"/-->
<antcall target="clean"/>
<!-- Unfortunately commit is not functional -->
<!--antcall target="commit"/-->
<antcall target="compileall"/>
<antcall target="jar"/>
<antcall target="javadoc"/>
<!-- may be useful to change directory -->
<zip zipfile="${FTPDir}/align-${version}.zip">
<fileset dir=".">
<include name="**/*"/>
<exclude name="**/.svn"/>
</fileset>
</zip>
</target>
<target name="svnCommit">
<property name="source-root" value="/usr/src"/>
<property name="repository.URL" value="http://sources.example.com"/>
<java classname="org.tmatesoft.svn.cli.SVN"
dir="${source-root}/TESTREPO" fork="true">
<arg value="commit"/>
<arg value="--username"/>
<arg value="admin"/>
<arg value="--password"/>
<arg value="admin"/>
<arg value="-m"/>
<arg value='"Testing"'/>
<arg value="${repository.URL}/TESTING"/>
<classpath>
<pathelement location="${antroot}/LIB/ganymed.jar" />
<pathelement location="${antroot}/LIB/javasvn.jar" />
<pathelement location="${antroot}/LIB/javasvn-cli.jar" />
</classpath>
</java>
</target>
<!-- This is for testing purposes, but has been found to work -->
<target name="status" depends="init">
<java classname="org.tmatesoft.svn.cli.SVN" dir="." fork="true">
<arg value="status" />
<classpath refid="classpath"/>
</java>
</target>
<!-- not tested yet -->
<target name="update" depends="init">
<java classname="org.tmatesoft.svn.cli.SVN" dir="." fork="true"
failonerror="true">
<sysproperty key="javasvn.ssh2.key"
value="/Volumes/Khata/.ssh/id_dsa" />
<!--sysproperty key="javasvn.ssh2.username" value="${login}" />
<sysproperty key="javasvn.ssh2.passphrase" value="aa" /-->
<arg value="update" />
<classpath refid="classpath"/>
</java>
</target>
<!-- not tested yet -->
<target name="commit" depends="update">
<java classname="org.tmatesoft.svn.cli.SVN" dir="." fork="true">
<arg value="commit" />
<arg value="--username" />
<arg value="${login}" />
<arg value="-m" />
<arg value='"Pre-release ${version}"' />
<classpath refid="classpath"/>
</java>
</target>
<!-- not tested yet -->
<target name="svnbranch" depends="">
<java classname="org.tmatesoft.svn.cli.SVN" dir="." fork="true">
<arg value="copy" />
<arg value="--username" />
<arg value="${login}" />
<arg value="${rep}/trunk" />
<arg value="${rep}/tags/version-${version}" />
<arg value="-m" />
<arg value='"Release ${version}"' />
<classpath refid="classpath"/>
</java>
</target>
<target name="clean">
<echo message="Cleaning..."/>
<delete>
<fileset dir="classes" includes="**/*.class"/>
<fileset dir="examples" includes="**/*.class"/>
<fileset dir="examples" includes="**/*.jar"/>
</delete>
</target>
</project>
plugins/src/fr/inrialpes/exmo/align/plugin/neontk/SWTInterface.java
+ 47
− 72
View file @ 1867c2b5
/*
* $Id$
*
* Copyright (C) INRIA Rhne-Alpes, 2007-2008
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation; either version 2.1 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*/
package fr.inrialpes.exmo.align.plugin.neontk; package fr.inrialpes.exmo.align.plugin.neontk;
import java.io.*; import java.io.*;
...@@ -21,21 +41,14 @@ import org.w3c.dom.Element; ...@@ -21,21 +41,14 @@ import org.w3c.dom.Element;
import org.w3c.dom.Node; import org.w3c.dom.Node;
import org.w3c.dom.NodeList; import org.w3c.dom.NodeList;
//import edu.stanford.smi.protege.util.*;
import fr.inrialpes.exmo.align.parser.*;
import fr.inrialpes.exmo.align.util.*;
import fr.inrialpes.exmo.align.impl.*;
import fr.inrialpes.exmo.align.impl.method.*;
import org.semanticweb.owl.align.*; import org.semanticweb.owl.align.*;
import org.semanticweb.owl.model.OWLOntology;
import org.semanticweb.owl.align.Alignment; import org.semanticweb.owl.align.Alignment;
import org.semanticweb.owl.align.AlignmentProcess; import org.semanticweb.owl.align.AlignmentProcess;
import org.semanticweb.owl.align.AlignmentVisitor; import org.semanticweb.owl.align.AlignmentVisitor;
import org.semanticweb.owl.align.Parameters; import org.semanticweb.owl.align.Parameters;
import org.semanticweb.owl.util.OWLManager;
import org.semanticweb.owl.model.OWLOntology; import fr.inrialpes.exmo.align.impl.BasicParameters;
import org.semanticweb.owl.io.owl_rdf.OWLRDFParser; import fr.inrialpes.exmo.align.impl.OntologyCache;
import org.semanticweb.owl.io.owl_rdf.OWLRDFErrorHandler;
import fr.inrialpes.exmo.align.impl.renderer.OWLAxiomsRendererVisitor; import fr.inrialpes.exmo.align.impl.renderer.OWLAxiomsRendererVisitor;
import fr.inrialpes.exmo.align.impl.renderer.HTMLRendererVisitor; import fr.inrialpes.exmo.align.impl.renderer.HTMLRendererVisitor;
...@@ -369,70 +382,32 @@ public class SWTInterface extends JPanel { ...@@ -369,70 +382,32 @@ public class SWTInterface extends JPanel {
if(online == false) { if(online == false) {
OWLOntology onto1 = null; //OWLOntology onto1 = null;
OWLOntology onto2 = null; //OWLOntology onto2 = null;
Parameters p = new BasicParameters(); Parameters p = new BasicParameters();
Parameters p2 = new BasicParameters(); AlignmentProcess A1 = null;
AlignmentProcess A1 = null;
AlignmentProcess A2 = null;
try {
OWLRDFParser parser = new OWLRDFParser();
parser.setConnection(OWLManager.getOWLConnection());
onto1 = parser.parseOntology((URI)uris.get(0));
onto2 = parser.parseOntology((URI)uris.get(1));
try {
//OWLRDFParser parser = new OWLRDFParser();
//parser.setConnection(OWLManager.getOWLConnection());
//onto1 = parser.parseOntology((URI)uris.get(0));
//onto2 = parser.parseOntology((URI)uris.get(1));
if( matching_method.equals("fr.inrialpes.exmo.align.impl.method.SubsDistNameAlignment") ) { try {
// Create alignment object
A1 = new SubsDistNameAlignment(onto1, onto2); Object[] mparams = {};
A2 = new SubsDistNameAlignment(onto1, onto2); Class alignmentClass = Class.forName(matching_method);
A1.align((Alignment)null,p); Class[] cparams = {};
A2.align((Alignment)null,p2); java.lang.reflect.Constructor alignmentConstructor = alignmentClass.getConstructor(cparams);
} A1 = (AlignmentProcess)alignmentConstructor.newInstance(mparams);
else if (matching_method.equals("fr.inrialpes.exmo.align.impl.method.NameEqAlignment") ) { A1.init( (URI)uris.get(0), (URI)uris.get(1), (OntologyCache)null );
A1 = new NameEqAlignment(onto1, onto2); } catch (Exception ex) {
A2 = new NameEqAlignment(onto1, onto2); System.err.println("Cannot create alignment "+matching_method+"\n"+ex.getMessage());
A1.align((Alignment)null,p); throw ex;
A2.align((Alignment)null,p2);
}
else if (matching_method.equals("fr.inrialpes.exmo.align.impl.method.StringDistAlignment") ) {
A1 = new StringDistAlignment(onto1, onto2);
A2 = new StringDistAlignment(onto1, onto2);
A1.align((Alignment)null,p);
A2.align((Alignment)null,p2);
}
else if (matching_method.equals("fr.inrialpes.exmo.align.impl.method.SMOANameAlignment") ) {
A1 = new SMOANameAlignment(onto1, onto2);
A2 = new SMOANameAlignment(onto1, onto2);
A1.align((Alignment)null,p);
A2.align((Alignment)null,p2);
}
else if (matching_method.equals("fr.inrialpes.exmo.align.impl.method.StrucSubsDistAlignment") ) {
A1 = new StrucSubsDistAlignment(onto1, onto2);
A2 = new StrucSubsDistAlignment(onto1, onto2);
A1.align((Alignment)null,p);
A2.align((Alignment)null,p2);
}
else if (matching_method.equals("fr.inrialpes.exmo.align.impl.method.NameAndPropertyAlignment") ) {
A1 = new NameAndPropertyAlignment(onto1, onto2);
A2 = new NameAndPropertyAlignment(onto1, onto2);
A1.align((Alignment)null,p);
A2.align((Alignment)null,p2);
}
else if (matching_method.equals("fr.inrialpes.exmo.align.impl.method.ClassStructAlignment") ) {
A1 = new ClassStructAlignment(onto1, onto2);
A2 = new ClassStructAlignment(onto1, onto2);
A1.align((Alignment)null,p);
A2.align((Alignment)null,p2);
}
else if (matching_method.equals("fr.inrialpes.exmo.align.impl.method.EditDistNameAlignment") ) {
A1 = new EditDistNameAlignment(onto1, onto2);
A2 = new EditDistNameAlignment(onto1, onto2);
A1.align((Alignment)null,p);
A2.align((Alignment)null,p2);
} }
A1.align((Alignment)null,p);
//for storing //for storing
FileWriter owlF = new FileWriter(new File( "align.owl")); FileWriter owlF = new FileWriter(new File( "align.owl"));
AlignmentVisitor V = new OWLAxiomsRendererVisitor( new PrintWriter ( owlF ) ); AlignmentVisitor V = new OWLAxiomsRendererVisitor( new PrintWriter ( owlF ) );
...@@ -446,7 +421,7 @@ public class SWTInterface extends JPanel { ...@@ -446,7 +421,7 @@ public class SWTInterface extends JPanel {
AlignmentVisitor V1 = new HTMLRendererVisitor( AlignmentVisitor V1 = new HTMLRendererVisitor(
new PrintWriter ( htmlF ) ); new PrintWriter ( htmlF ) );
A2.render(V1); A1.render(V1);
htmlF.close(); htmlF.close();
String htmlString = fileToString(new File ("align.html")); String htmlString = fileToString(new File ("align.html"));
......
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