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genetic code of 64 redondant codons with retrocompatibility of traduction with aevol 2 bases

Merged FOLEY Marco requested to merge 64_codons into aevol_4b
5 files
+ 40
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@@ -463,7 +463,7 @@ namespace aevol {
for (int k = 0; k < 9; k++) {
int k_t = k >= 6 ? k + 4 : k;
if (indiv_->dna_->data_[(pos + k_t) + ((((uint32_t)((pos + k_t) - len)) >> 31) -1 )* len] ==
if (indiv_->dna_->data_[(pos + k_t) + ((((uint32_t)((pos + k_t) - len)) >> 31) -1 )* len] %2 ==
SHINE_DAL_SEQ_LEAD[k]) {
start[k] = true;
} else {
@@ -483,7 +483,7 @@ namespace aevol {
for (int k = 0; k < 9; k++) {
int k_t = k >= 6 ? k + 4 : k;
if (indiv_->dna_->data_[(pos - k_t) + (((uint32_t)((pos - k_t))) >> 31) * len] ==
if (indiv_->dna_->data_[(pos - k_t) + (((uint32_t)((pos - k_t))) >> 31) * len] %2 ==
SHINE_DAL_SEQ_LAG[k]) {
start = true;
} else {
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