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Created with Raphaël 2.2.023Feb15824Jan12421Dec151312730Nov2827232117Add function find_alignmentAdd align_score functionFIX wrong function callIn Eukaryotes, we return an empty list instead of a full oneremoving prints in Eukaryotes because individuals are deleted between each generationremove nb_clones from Statsadd function to AnnotatedChromosome to look for promoters at given pointadd more assert to be sureadd comment to promoter handling: pos 2 is excludedadd function length() to AnnotatedChromosomeAdding a random number generator to Individual_7FIX: error with selfingsex-rebasedsex-rebasedgetting the selfing_rate from Aevol6storing the selfing_rate into Selection for realadding selfing_rate to Selectionstoring the selfing_rate from the param file to ParamValuesadding a selfing_rate to ParamValuesadd comment to specify the usage of selfing_rateadd assert to verify that selfing rate is enforcedadd selfing to global selectionAdd better selfing handling to local selectionMinimalist selfing implementationrandomize the order of parental chromosomescopy the promoter_lists from parents to child when reproducing sexuallyWIP fix indiv computation at each generation (pb due to sex)randomly choose which chromosome each parent will provideWIP implement sexual reproductionadd named ctor Individual_7::make_from_parentsWIP add next_generation_reproducer_2 in local selectionWIP add second next_generation_reproducer when selection scpoe is globalmove next_generation_reproducer_ to ExpManager_7reformat commentbug_fuzzybug_fuzzyremove stale commentfix commentfix order of operations in x interpolationfast-forward over interpolated point in clippinghandle special case when interpolated_x is already presentformathandle trivial cases in x interpolationadd "log" output to lineage