Commits · cbc45792e9067f3c809ce1fe75d5d0a874bcf900 · LUISELLI Juliette / aevol-eukaryotes

Dec 12, 2023
- remove duplicate include · cbc45792
  David Parsons authored 1 year ago
  
  cbc45792
- setup FetchContent dependency to googletest · 5f17ca75
  David Parsons authored 1 year ago
  
  5f17ca75
- fix misleading comment · 3730676e
  David Parsons authored 1 year ago
  
  3730676e
- streamline construction of Indiv/Chrom/Dna · 6540a167
  David Parsons authored 1 year ago
  
  Mostly: - Manage cross-refs from within the class hierarchy - Manage DnaFactory through Dna (making it an optional thing to worry about)
  6540a167
- add named ctor Individual_7::make_from_sequence · 9a357101
  David Parsons authored 1 year ago
  
  9a357101
- add named ctor AnnotatedChromosome::make_from_sequence · d46ac075
  David Parsons authored 1 year ago
  
  d46ac075
- add missing init of Dna_7::ann_chrsm_ · d8ff76b4
  David Parsons authored 1 year ago
  
  d8ff76b4
- add named ctor Dna_7::make_from_sequence · c41edf21
  David Parsons authored 1 year ago
  
  c41edf21
- extract fn Dna_7::reserve · a0bb0264
  David Parsons authored 1 year ago
  
  a0bb0264
- remove code duplication · ad73a9ce
  David Parsons authored 1 year ago
  
  ad73a9ce
- remove stale legacy class fwd decl · 655d4e48
  David Parsons authored 1 year ago
  
  655d4e48
- refactor fn -> Dna_7::reset_sequence · d00a35af
  David Parsons authored 1 year ago
  
  d00a35af
- set parent_length from without Dna_7::set_indiv(Dna* dna) · 361f8513
  David Parsons authored 1 year ago
  
  361f8513
- add fn Dna_7::set_parent_length · da48f05d
  David Parsons authored 1 year ago
  
  da48f05d
- add default init for Dna_7::ann_chrsm_ · 72d27fa6
  David Parsons authored 1 year ago
  
  72d27fa6
- add default init for Dna_7::indiv_ · 88793393
  David Parsons authored 1 year ago
  
  88793393
- remove duplicate init statement · fab5c19c
  David Parsons authored 1 year ago
  
  fab5c19c
- add params to legal Individual_7 ctor · 74b8fbde
  David Parsons authored 1 year ago
  
  74b8fbde
- release Dna from AnnotatedChromosome · 038a75a6
  David Parsons authored 1 year ago
  
  038a75a6
- manage DnaFactory through Dna · 470c6566
  David Parsons authored 1 year ago
  
  470c6566
- fix mismatched if-guard · 8b59de7c
  David Parsons authored 1 year ago
  
  8b59de7c
- fix type mismatch · e3dbf0e6
  David Parsons authored 1 year ago
  
  e3dbf0e6
- use Dna_7::size_t in DnaFactory · 4ed3fd77
  David Parsons authored 1 year ago
  
  4ed3fd77
- use type type Dna_7::size_type throughout Dna_7+ · da70f834
  David Parsons authored 1 year ago
  
  da70f834
- remove Utils::min and max (use std) · c526f4cc
  David Parsons authored 1 year ago
  
  c526f4cc
- make Utils::mod a template · fa32d586
  David Parsons authored 1 year ago
  
  fa32d586
- temp type hacks · 0054380c
  David Parsons authored 1 year ago
  
  0054380c
- declare type Dna_7::size_type · 49a2a1bb
  David Parsons authored 1 year ago
  
  49a2a1bb
- mark class Dna_7 as final · 13463f86
  David Parsons authored 1 year ago
  
  13463f86
- make Dna_7 OCCF · 9183309c
  David Parsons authored 1 year ago
  
  9183309c
- protect Dna_7 dtor · 111a24b0
  David Parsons authored 1 year ago
  
  111a24b0
- protect Dna_7 ctor · 42cf49a4
  David Parsons authored 1 year ago
  
  42cf49a4
- remove commented code · 2ed48966
  David Parsons authored 1 year ago
  
  2ed48966
- make DnaFactory OCCF · 4cd22483
  David Parsons authored 1 year ago
  
  4cd22483
- remove commented variables · 282aa3bd
  David Parsons authored 1 year ago
  
  282aa3bd
- move fn defs to .cpp · 73989d59
  David Parsons authored 1 year ago
  
  73989d59
- reformat DnaFactory.cpp · 61a2f463
  David Parsons authored 1 year ago
  
  61a2f463
- reformat DnaFactory.h · e2f74ab8
  David Parsons authored 1 year ago
  
  e2f74ab8
- add missing include · d9667c38
  David Parsons authored 1 year ago
  
  d9667c38
- remove stale variable Dna_7::dna_factory_ · a9bb9391
  David Parsons authored 1 year ago
  
  a9bb9391