Commits · 9040ef0dbceccb816d1c84d0538a0b787ef49cb9 · LUISELLI Juliette / aevol-eukaryotes · GitLab

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Oct 03, 2019
- fix the no genome (size=0) bug · 9040ef0d
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  9040ef0d
Jul 19, 2019
- Fix raevol implementation + fix warnings (ready for Aevol 6.0 Alpha) · e55648a5
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  aevol_6_alpha
  
  e55648a5
Jul 16, 2019
- RAevol is now working · 0cb989fb
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  0cb989fb
Jul 11, 2019
- parallel tree fix · 73875c53
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  73875c53
Jul 09, 2019
- Working and reproduceable vanilla parallel version · 27f08a31
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  27f08a31
Jun 25, 2019
- Fix issue when using the Intel compiler · 3585f5a8
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  3585f5a8
- Switch to CMake (autotool is no more available) · 77502943
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  77502943
- The 6 versions (SIMD/Vanilla + No Tree/Tree/LightTree) are validated against each other · 79f70729
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  79f70729
Jun 21, 2019
- Complete CMake but not working (seg fault) · 526b3749
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  526b3749
- Merging process is over, code compile, autotools replace by CMake · 8a4546e8
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  8a4546e8
Jun 20, 2019
- Merge large_campaign, triangle, raevol_ng repository · 0e01dd9a
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  0e01dd9a
Jun 14, 2019
- Manual merge with aevol_ltisee repository (on gitlab.inria.fr) · a629f777
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  a629f777
Jun 12, 2019
- The 4 versions are now validated against each other · eb9fdb99
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  eb9fdb99
Jun 11, 2019
- SIMD + Vanilla Tree are validated, Vanilla Light Tree is NOT working ATM · 59f29fbf
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  59f29fbf
- Fix memory leak for the 4 versions, still not validated · cdb3a85b
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  cdb3a85b
- 4 versions (SIMD/Vanilla -- Tree/LightTree) are running, still not validated · 4a6e792f
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  4a6e792f
Jun 04, 2019
- Tree/LightTree are not crashing, but not working yet · a6f6b57f
  ROUZAUD-CORNABAS Jonathan authored 5 years ago
  
  a6f6b57f
Aug 30, 2018
- First version with LightTree support (only compile, not tested) · f2acf698
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  f2acf698
Aug 28, 2018
- Perfectly reproduceable SIMD/Vanilla version with Tree · f69cf59a
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  f69cf59a
Aug 24, 2018
- Tree/lineage/ancestor stats are working for both vanilla and SIMD (but... · a070bef4
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  Tree/lineage/ancestor stats are working for both vanilla and SIMD (but reproduceability issues between both)
  a070bef4
Aug 23, 2018
- Fix tree for SIMD version (vanilla still broken) · e4377195
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  e4377195
Aug 21, 2018
- Working on Tree (no crash, no memory leak) but not yet working · a8bf67f0
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  a8bf67f0
Aug 16, 2018
- Full support of Tree with SIMD but no tested and lineage posttreatment is broken · 64e61dea
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  64e61dea
- SIMD is fully repeatable against Aevol vanilla ! Beginning of support of Tree · 921df65c
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  921df65c
Aug 14, 2018
- Version used for performance profiling · acd32dc7
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  acd32dc7
Jul 10, 2018
- Fix memory leak + add configure switch for different level of parallelism (and intel hack) · b6da8482
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  b6da8482
Jul 03, 2018
- OpenMP Taskloop for individual (and taskloop within individual), not working on intel · 5d9f51d5
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  5d9f51d5
- TaskLoop OpenMP with fine grain parallelism · 89583e0c
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  89583e0c
- Verified version with OpenMP Task without dependency · fbec5a38
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  fbec5a38
- Working OpenMP task parallelism · 213c3969
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  213c3969
Jun 28, 2018
- Perfect reproduceability against vanilla Aevol version · 9cb32bb6
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  9cb32bb6
Jun 14, 2018
- Another way of doing task parallelism (dependencies are not really used) · 6d80051e
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  6d80051e
Jun 08, 2018
- Working version with openmp task (but large overhead+spin time) · ae86038c
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  ae86038c
Jun 07, 2018
- Working SIMD version with stats and backup/restore · 314da37b
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  314da37b
Jun 05, 2018
- Fix a lot of memory leak, issue with updating promoters and fix support of bitset · 5c2db184
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  5c2db184
Jun 01, 2018
- fix bitset (but maybe break a lot of things such as no backup anymore) · 95956c63
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  95956c63
- Almost working · 0750c216
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  0750c216
Apr 12, 2018
- Fix for insert and other bugs during mutation · 5dd7179d
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  5dd7179d
- Fix for insert and other bugs during mutation · 15729bdc
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  15729bdc
Apr 10, 2018
- Working version of SIMD OpenMP Task without memory leak (but some bugs) · f5261291
  ROUZAUD-CORNABAS Jonathan authored 6 years ago
  
  f5261291