adapt stats computation to fit both eukaryotic and prokaryotic case in ReplicationReport

src/libaevol/io/ReplicationReport.cpp

@@ -275,13 +275,13 @@ void ReplicationReport::signal_end_of_replication(Individual_7* indiv) {
       if (simd_indiv_ == NULL) simd_indiv_ = indiv;
 
       // Retrieve data from the individual
-      genome_size_        = simd_indiv_->annotated_chromosome_[A]->dna_->length();
+      genome_size_        = simd_indiv_->dna_length();
       metabolic_error_    = simd_indiv_->metaerror;
-      nb_genes_activ_     = simd_indiv_->annotated_chromosome_[A]->nb_genes_activ;
-      nb_genes_inhib_     = simd_indiv_->annotated_chromosome_[A]->nb_genes_inhib;
-      nb_non_fun_genes_   = simd_indiv_->annotated_chromosome_[A]->nb_func_genes;
-      nb_coding_RNAs_     = simd_indiv_->annotated_chromosome_[A]->nb_coding_RNAs;
-      nb_non_coding_RNAs_ = simd_indiv_->annotated_chromosome_[A]->nb_non_coding_RNAs;
+      nb_genes_activ_     = simd_indiv_->nb_genes_activ();
+      nb_genes_inhib_     = simd_indiv_->nb_genes_inhib();
+      nb_non_fun_genes_   = simd_indiv_->nb_func_genes();
+      nb_coding_RNAs_     = simd_indiv_->nb_coding_RNAs();
+      nb_non_coding_RNAs_ = simd_indiv_->nb_non_coding_RNAs();
 }
 /**
  * Method called at the end of a generation.