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Machine learning for population genetics
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163
Closed
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Updated date
[docker] modify the Dockerfile so that the user is logged in as a non-root user
dnadna!21
· created
Jun 11, 2020
by
E. Madison Bray
priority: medium
type: enhancement
Merged
0
updated
Jun 12, 2020
Further updates to the Docker image build
dnadna!22
· created
Jun 12, 2020
by
E. Madison Bray
component: ci
priority: high
type: bug
Merged
0
updated
Jun 12, 2020
[enhancement] add separate random seed for pre-processing
dnadna!26
· created
Jun 24, 2020
by
E. Madison Bray
component: datasets
priority: medium
type: enhancement
Merged
0
updated
Jun 24, 2020
WIP: Resolve "Add CLI interface to list networks, their descriptions, and any options they take"
dnadna!29
· created
Jul 15, 2020
by
JOBIC Pierre
component: nets
priority: medium
type: enhancement
Closed
0
updated
Jul 15, 2020
Improve raised InvalidSNPSample Error
dnadna!28
· created
Jul 10, 2020
by
Jean Cury
component: cli
component: training
priority: medium
type: enhancement
Merged
1
updated
Jul 17, 2020
WIP: Resolve "Work with another dataset: ValueError("No objects to concatenate")"
dnadna!31
· created
Jul 21, 2020
by
JOBIC Pierre
component: datasets
type: bug
6
updated
Jul 21, 2020
[bug][#34] remove superfluous squeeze/unsqueeze from this code which led to a
dnadna!25
· created
Jun 16, 2020
by
E. Madison Bray
component: training
priority: high
type: bug
Merged
0
updated
Jul 21, 2020
[docker] switch to using upstream fixuid v0.5
dnadna!23
· created
Jun 12, 2020
by
E. Madison Bray
type: task
Merged
0
updated
Jul 22, 2020
[bug][!33] alternative fix for the issue raised in MR !33
dnadna!37
· created
Jul 29, 2020
by
E. Madison Bray
component: datasets
priority: high
type: bug
Merged
5
updated
Aug 03, 2020
Handling multiple dataset name format
dnadna!33
· created
Jul 21, 2020
by
JOBIC Pierre
Closed
21
updated
Aug 03, 2020
Don't write checkpoints or error logs by default when calling ModelTrainer.train()
dnadna!38
· created
Aug 07, 2020
by
E. Madison Bray
component: training
priority: high
type: bug
Merged
0
updated
Aug 07, 2020
[refactoring] clean up the semantics of when/whether SNP and POS arrays are copied when instantiating an SNPSample
dnadna!41
· created
Oct 12, 2020
by
E. Madison Bray
component: datasets
priority: high
type: bug
Merged
1
updated
Oct 12, 2020
WIP: add -V/--version arguments with tests
dnadna!27
· created
Jul 03, 2020
by
Jean Cury
component: cli
priority: low
Closed
9
updated
Oct 14, 2020
TensorBoard and Checkpoint for model
dnadna!36
· created
Jul 29, 2020
by
JOBIC Pierre
Merged
21
updated
Oct 22, 2020
Jcury/fix preprocessing
dnadna!44
· created
Oct 23, 2020
by
Jean Cury
component: datasets
priority: high
type: bug
Closed
3
updated
Oct 27, 2020
Added dnadna/info.py
dnadna!30
· created
Jul 15, 2020
by
JOBIC Pierre
26
updated
Nov 01, 2020
fix issues caught by flake8 and add CI job to run linter
dnadna!46
· created
Nov 02, 2020
by
E. Madison Bray
priority: low
type: task
Merged
0
updated
Nov 02, 2020
Pj/refactoring/running loss
dnadna!43
· created
Oct 22, 2020
by
JOBIC Pierre
Closed
3
updated
Nov 03, 2020
[bug] normalized array of position can include 1.
dnadna!47
· created
Nov 04, 2020
by
Jean Cury
Release 1.0.0
component: datasets
type: bug
Merged
Approved
2
updated
Nov 05, 2020
Possible workaround to #52
dnadna!52
· created
Dec 11, 2020
by
E. Madison Bray
Merged
Approved
1
updated
Dec 11, 2020
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