keep all times in df output

src/gnomon_package_tissueimagemesh/algorithm/cellImageQuantification/surfaceMeshCellCurvature.py

@@ -84,7 +84,3 @@ class surfaceMeshCellCurvature(gnomonAbstractCellImageQuantification):
             self.out_tissue[time] = out_tissue
 
             self.df[time] = cells_to_dataframe(out_tissue.cells, cell_ids=out_tissue.cell_ids())
-            self.df[time]['time'] = time
-
-        if len(self.df) > 0:
-            self.df = {0: pd.concat([self.df[time] for time in self.df.keys()])}

src/gnomon_package_tissueimagemesh/algorithm/cellImageQuantification/surfaceMeshCellLayer.py

@@ -85,7 +85,3 @@ class surfaceMeshCellLayer(gnomonAbstractCellImageQuantification):
             self.out_tissue[time] = out_tissue
 
             self.df[time] = cells_to_dataframe(out_tissue.cells, cell_ids=out_tissue.cell_ids())
-            self.df[time]['time'] = time
-
-        if len(self.df) > 0:
-            self.df = {0: pd.concat([self.df[time] for time in self.df.keys()])}

src/gnomon_package_tissueimagemesh/algorithm/cellImageQuantification/surfaceMeshCellProperty.py

@@ -108,7 +108,3 @@ class surfaceMeshCellProperty(gnomonAbstractCellImageQuantification):
             self.out_tissue[time] = out_tissue
 
             self.df[time] = cells_to_dataframe(out_tissue.cells, cell_ids=out_tissue.cell_ids())
-            self.df[time]['time'] = time
-
-        if len(self.df)>0:
-            self.df = {0: pd.concat([self.df[time] for time in self.df.keys()])}

src/gnomon_package_tissueimagemesh/algorithm/cellImageQuantification/wallMeshImageSignal.py

@@ -101,7 +101,3 @@ class wallMeshImageSignal(gnomonAbstractCellImageQuantification):
             self.out_tissue[time] = out_tissue
 
             self.df[time] = cells_to_dataframe(out_tissue.cells, cell_ids=out_tissue.cell_ids())
-            self.df[time]['time'] = time
-
-        if len(self.df) > 0:
-            self.df = {0: pd.concat([self.df[time] for time in self.df.keys()])}

src/gnomon_package_tissueimagemesh/algorithm/cellImageQuantification/wallMeshSignalPolarities.py

@@ -140,7 +140,3 @@ class wallMeshSignalPolarities(gnomonAbstractCellImageQuantification):
             self.out_tissue[time] = out_tissue
 
             self.df[time] = cell_walls_to_dataframe(out_tissue.walls, cell_ids=out_tissue.cell_ids())
-            self.df[time]['time'] = time
-
-        if len(self.df) > 0:
-            self.df = {0: pd.concat([self.df[time] for time in self.df.keys()])}

src/gnomon_package_tissueimagemesh/algorithm/pointCloudQuantification/nucleiCurvatureNukem.py

@@ -103,7 +103,3 @@ class nucleiCurvatureNukem(gnomonAbstractPointCloudQuantification):
 
             self.out_topomesh[time] = out_topomesh
             self.df[time] = topomesh_to_dataframe(out_topomesh, 0)
-            self.df[time]['time'] = time
-
-        if len(self.df)>0:
-            self.df = {0:pd.concat([self.df[time] for time in self.df.keys()])}
\ No newline at end of file

src/gnomon_package_tissueimagemesh/algorithm/pointCloudQuantification/nucleiLayerEstimation.py

@@ -110,7 +110,3 @@ class nucleiLayerEstimation(gnomonAbstractPointCloudQuantification):
             self.out_df[time] = out_df
 
             self.data_df[time] = deepcopy(out_df)
-            self.data_df[time]['time'] = time
-
-        if len(self.data_df)>0:
-            self.data_df = {0: pd.concat([self.data_df[time] for time in self.data_df.keys()])}

src/gnomon_package_tissueimagemesh/algorithm/pointCloudQuantification/surfaceMeshProperty.py

@@ -93,7 +93,3 @@ class surfaceMeshProperty(gnomonAbstractPointCloudQuantification):
             self.out_df[time] = out_df
 
             self.data_df[time] = deepcopy(out_df)
-            self.data_df[time]['time'] = time
-
-        if len(self.data_df)>0:
-            self.data_df = {0: pd.concat([self.data_df[time] for time in self.data_df.keys()])}