update recipe + CI

.gitlab-ci.yml

@@ -20,7 +20,8 @@ releaseTest:
   script:
     - . "/builds/miniconda3/etc/profile.d/conda.sh"
     - conda activate base
-    - mamba env update -f conda/env.yaml
+    - conda env remove -n gnomon_package_tissueimagemesh
+    - mamba env create -f conda/env.yaml
     - conda activate gnomon_package_tissueimagemesh
     - python -m pip install .
     - nose2 -v
@@ -37,7 +38,8 @@ test_MR_linux:
   script:
     - . "/builds/miniconda3/etc/profile.d/conda.sh"
     - conda activate base
-    - mamba env update -f conda/env.yaml
+    - conda env remove -n gnomon_package_tissueimagemesh
+    - mamba env create -f conda/env.yaml
     - conda activate gnomon_package_tissueimagemesh
     - python -m pip install .
     - nose2 -v
@@ -72,7 +74,8 @@ test_MR_macos:
   script:
     - source /Users/ci/miniconda3/etc/profile.d/conda.sh
     - conda activate base
-    - mamba env update -f conda/env.yaml
+    - conda env remove -n gnomon_package_tissueimagemesh
+    - mamba env create -f conda/env.yaml
     - conda activate gnomon_package_tissueimagemesh
     - pip install .
     - nose2 -v
@@ -124,9 +127,7 @@ anaconda:
   script:
     - . "/builds/miniconda3/etc/profile.d/conda.sh"
     - conda activate base
-    - anaconda --token=$ANACONDA_TOKEN --verbose upload conda-bld/linux-64/gnomon_package_tissueimagemesh-* --user gnomon --force
-    - conda convert -p osx-64 conda-bld/linux-64/gnomon_package_tissueimagemesh-* --output-dir conda-bld/
-    - anaconda --token=$ANACONDA_TOKEN --verbose upload conda-bld/osx-64/gnomon_package_tissueimagemesh-* --user gnomon --force
+    - anaconda --token=$ANACONDA_TOKEN --verbose upload conda-bld/noarch/gnomon_package_tissueimagemesh-* --user gnomon --force
   only:
     - master
 
@@ -138,9 +139,7 @@ anaconda_develop:
   script:
     - . "/builds/miniconda3/etc/profile.d/conda.sh"
     - conda activate base
-    - anaconda --token=$ANACONDA_TOKEN --verbose upload conda-bld/linux-64/gnomon_package_tissueimagemesh-* --user gnomon --force
-    - conda convert -p osx-64 conda-bld/linux-64/gnomon_package_tissueimagemesh-* --output-dir conda-bld/
-    - anaconda --token=$ANACONDA_TOKEN --verbose upload conda-bld/osx-64/gnomon_package_tissueimagemesh-* --user gnomon --force
+    - anaconda --token=$ANACONDA_TOKEN --verbose upload conda-bld/noarch/gnomon_package_tissueimagemesh-* --user gnomon --force
   when: manual
   only:
     - develop

CHANGES.md

@@ -7,6 +7,6 @@
 
 
 ## version 0.3.0 - 2023-07-10
-* gnomon 1.0.0
+* gnomon 0.81.0
 * new cell layer/curvature plugin
 * enhance image surface plugin

README.md

-# Gnomon plugin package : `Tissue Image Mesk`
+# Gnomon plugin package : `Tissue Image Mesh`
 
 This package contains Python plugins for the [Gnomon computational platform](https://gnomon.gitlabpages.inria.fr/gnomon/) to convert 3D images into topological representations.
\ No newline at end of file

conda/env.yaml

@@ -4,12 +4,13 @@ channels:
   - mosaic
   - morpheme
   - gnomon
-  - dtk-forge-staging
+  - dtk-forge6
   - conda-forge
 dependencies:
   - python=3.9
   - gnomon=1.0
   - gnomon_package_tissueimage
+  - gnomon_package_tissuemesh
   - ipython
   - nose2
   - coverage

conda/meta.yaml

 package:
   name: gnomon_package_tissueimagemesh
-  # version: {{ environ.get('GIT_DESCRIBE_TAG', 'default') }}
-  version: 1.0.0
+  version: {{ environ.get('GIT_DESCRIBE_TAG', 'default') }}
 
 source:
   path: ../