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Commit 86a86061 authored by CERUTTI Guillaume's avatar CERUTTI Guillaume
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remove deprecated draco plugin + fix curvature test

parent 7db7b646
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...@@ -38,7 +38,7 @@ setup_kwds = dict( ...@@ -38,7 +38,7 @@ setup_kwds = dict(
entry_points={ entry_points={
'cellComplexFromCellImage': [ 'cellComplexFromCellImage': [
'cellReconstructionGrifone = gnomon_package_tissueimagemesh.algorithm.cellComplexFromCellImage.cellReconstructionGrifone', 'cellReconstructionGrifone = gnomon_package_tissueimagemesh.algorithm.cellComplexFromCellImage.cellReconstructionGrifone',
'cellReconstructionDracoStem = gnomon_package_tissueimagemesh.algorithm.cellComplexFromCellImage.cellReconstructionDracoStem' # 'cellReconstructionDracoStem = gnomon_package_tissueimagemesh.algorithm.cellComplexFromCellImage.cellReconstructionDracoStem'
], ],
'cellImageQuantification': [ 'cellImageQuantification': [
'surfaceMeshCellCurvature = gnomon_package_tissueimagemesh.algorithm.cellImageQuantification.surfaceMeshCellCurvature', 'surfaceMeshCellCurvature = gnomon_package_tissueimagemesh.algorithm.cellImageQuantification.surfaceMeshCellCurvature',
......
...@@ -23,19 +23,19 @@ class TestGnomonCellComplexFromCellImage(unittest.TestCase): ...@@ -23,19 +23,19 @@ class TestGnomonCellComplexFromCellImage(unittest.TestCase):
self.cellImage = self.reader.cellImage() self.cellImage = self.reader.cellImage()
self.draco_stem = gnomon.core.cellComplexFromCellImage_pluginFactory().create("cellReconstructionDracoStem") self.grifone = gnomon.core.cellComplexFromCellImage_pluginFactory().create("cellReconstructionGrifone")
def tearDown(self): def tearDown(self):
self.reader.this.disown() self.reader.this.disown()
self.draco_stem.this.disown() self.grifone.this.disown()
def test_gnomonCellComplexFromCellImage_2d(self): def test_gnomonCellComplexFromCellImage_2d(self):
self.draco_stem.setInput(self.cellImage) self.grifone.setInput(self.cellImage)
self.draco_stem.refreshParameters() self.grifone.refreshParameters()
self.draco_stem.setParameter("dimension", 3) self.grifone.setParameter("dimension", 2)
self.draco_stem.run() self.grifone.run()
assert self.draco_stem.output() is not None assert self.grifone.output() is not None
cellcomplex = self.draco_stem.output()[0] cellcomplex = self.grifone.output()[0]
assert cellcomplex.elementCount(3) > 0 assert cellcomplex.elementCount(2) > 0
# test_gnomonCellComplexFromCellImage.py ends here. # test_gnomonCellComplexFromCellImage.py ends here.
...@@ -34,8 +34,8 @@ class TestSurfaceMeshCurvature(unittest.TestCase): ...@@ -34,8 +34,8 @@ class TestSurfaceMeshCurvature(unittest.TestCase):
self.curvature.refreshParameters() self.curvature.refreshParameters()
self.curvature.run() self.curvature.run()
assert self.curvature.cellImage() is not None assert self.curvature.outputCellImage() is not None
cellImage = self.curvature.cellImage()[0] cellImage = self.curvature.outputCellImage()[0]
assert "mean_curvature" in cellImage.cellPropertyNames() assert "mean_curvature" in cellImage.cellPropertyNames()
# test_gnomonCellComplexFromCellImage.py ends here. # test_gnomonCellComplexFromCellImage.py ends here.
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