Commits · f29745b5ddb24ffbaf575f70fb03fad4606a6e4f · DEBREUVE Eric / NutriMorph

Mar 26, 2021
- resized image quality now ok; resize event processing still not appropriate · f29745b5
  DEBREUVE Eric authored 4 years ago
  
  f29745b5
Mar 25, 2021
- attempt to implement auto image resizing with wdw · 9bd73062
  DEBREUVE Eric authored 4 years ago
  
  9bd73062
Mar 23, 2021
- added mip axis selection · ccba4cd5
  DEBREUVE Eric authored 4 years ago
  
  ccba4cd5
Mar 22, 2021
- added gfp image · f1671d52
  DEBREUVE Eric authored 4 years ago
  
  f1671d52
Mar 16, 2021
- added matplotlib colormap-based mip coloring · 6f5f04c4
  DEBREUVE Eric authored 4 years ago
  
  6f5f04c4
- alternative metadata processing (but not activated yet) · 664c9253
  DEBREUVE Eric authored 4 years ago
  
  664c9253
- large refactoring · 3f530135
  DEBREUVE Eric authored 4 years ago
  
  3f530135
Mar 12, 2021
- added label for cursor info · acda0f74
  DEBREUVE Eric authored 4 years ago
  
  acda0f74
- refactored soma validation interface + color · 1f68b7fd
  DEBREUVE Eric authored 4 years ago
  
  1f68b7fd
Mar 11, 2021
- added basic soma validation interface · 1b41ed0e
  DEBREUVE Eric authored 4 years ago
  
  1b41ed0e
Feb 03, 2021
- adaptation to local env · 2e57a10e
  DEBREUVE Eric authored 4 years ago
  
  2e57a10e
Jul 23, 2020
- small corrections · 2601a1b2
  NADAL Morgane authored 4 years ago
  
  2601a1b2
Jul 03, 2020
- usable version of dilatation/erosion during connexion of extensions · 44e96ffb
  NADAL Morgane authored 4 years ago
  
  44e96ffb
Jun 29, 2020
- usable version with choice btw w or wo dilatation/erosion. · df243383
  NADAL Morgane authored 4 years ago
  
  For the moment, more relevant results (biologically speaking) without dilatation/erosion.
  df243383
Jun 26, 2020
- EROSION/DILATATION during connexion: added possibility to choose between 2... · c5b6acb2
  NADAL Morgane authored 4 years ago
  
  EROSION/DILATATION during connexion: added possibility to choose between 2 erosion conditions. The strict one seems to be best (strict_erosion=True)
  c5b6acb2
- solved bug: singular matrices in best fitting ellipsoid · 6f64d820
  NADAL Morgane authored 4 years ago
  
  6f64d820
Jun 25, 2020
- solved EROSION/DILATATION bug · 1e026ed9
  NADAL Morgane authored 4 years ago
  
  1e026ed9
- handle singular matrices · 4d83b318
  NADAL Morgane authored 4 years ago
  
  4d83b318
Jun 24, 2020
- added soma uid to feature df · 8f32100b
  NADAL Morgane authored 4 years ago
  
  8f32100b
Jun 23, 2020
- change the output dataframe to ease statistical analysis · 999c0a99
  NADAL Morgane authored 4 years ago
  
  999c0a99
- improve interface & prms · 2a162674
  NADAL Morgane authored 4 years ago
  
  2a162674
Jun 22, 2020

solved BIG BUG: tangency of extensions and connexions leading to... · 9f4cdf48

NADAL Morgane authored 4 years ago

solved BIG BUG: tangency of extensions and connexions leading to "deskeletonization" and sklgraph incoherence with python objects

9f4cdf48

Jun 17, 2020
- solved BUG: free ext in cell graph · 0ac4c20d
  NADAL Morgane authored 4 years ago
  
  0ac4c20d
Jun 15, 2020
- solved soma_volume/convex_hull_volume issue · 522209af
  NADAL Morgane authored 4 years ago
  
  522209af
- solved soma_volume/convex_hull_volume issue · d3df13f8
  NADAL Morgane authored 4 years ago
  
  d3df13f8
Jun 12, 2020
- Format update: NutriMorph can be run on a file or on multiple files within repositories · 62d76ae3
  NADAL Morgane authored 4 years ago
  
  62d76ae3
- update: prm differenciation mode in frangi --> indirect · 5256359b
  NADAL Morgane authored 4 years ago
  
  5256359b
- update frangi3D + gui interface for frangi parameter determination · 96b6aca5
  NADAL Morgane authored 4 years ago
  
  96b6aca5
- update: thinning after skeletonization in nutrimorph.py and skl_map.py · 986ed789
  NADAL Morgane authored 4 years ago
  
  986ed789
- small correction · 40ccd520
  NADAL Morgane authored 4 years ago
  
  40ccd520
Jun 11, 2020
- Annotated the whole Nutrimorph script, except specific fcts in Frangi, Dijkstra and SKLGraph. · d4054214
  NADAL Morgane authored 4 years ago
  
  d4054214
Jun 08, 2020
- some modifs · 4cadf915
  NADAL Morgane authored 4 years ago
  
  4cadf915
- delete too big somas · 5a3fbfdc
  NADAL Morgane authored 4 years ago
  
  + under dev: delete too big extensions
  5a3fbfdc
Jun 05, 2020
- solved hysteresis bug - still in dvpt · c7b23f47
  NADAL Morgane authored 4 years ago
  
  c7b23f47
- working on hysteresis bug · 4a5d39df
  NADAL Morgane authored 4 years ago
  
  4a5d39df
May 20, 2020
- solved ellipsoid axes order issue · d8c384d3
  NADAL Morgane authored 4 years ago
  
  d8c384d3
May 18, 2020
- cleaning · 5ac30385
  NADAL Morgane authored 4 years ago
  
  5ac30385
- cleaning · 67980fc4
  NADAL Morgane authored 4 years ago
  
  67980fc4
May 14, 2020
- bugs correction · f0c8c483
  NADAL Morgane authored 4 years ago
  
  f0c8c483
- bugs correction · 8105237d
  NADAL Morgane authored 4 years ago
  
  8105237d