Commits · 96b6aca5338eb5a837f99dc670ae255a9e31c7bf · DEBREUVE Eric / NutriMorph

Jun 12, 2020
- update frangi3D + gui interface for frangi parameter determination · 96b6aca5
  NADAL Morgane authored 4 years ago
  
  96b6aca5
- update: thinning after skeletonization in nutrimorph.py and skl_map.py · 986ed789
  NADAL Morgane authored 4 years ago
  
  986ed789
- small correction · 40ccd520
  NADAL Morgane authored 4 years ago
  
  40ccd520
Jun 11, 2020
- Annotated the whole Nutrimorph script, except specific fcts in Frangi, Dijkstra and SKLGraph. · d4054214
  NADAL Morgane authored 4 years ago
  
  d4054214
Jun 08, 2020
- some modifs · 4cadf915
  NADAL Morgane authored 4 years ago
  
  4cadf915
- delete too big somas · 5a3fbfdc
  NADAL Morgane authored 4 years ago
  
  + under dev: delete too big extensions
  5a3fbfdc
Jun 05, 2020
- solved hysteresis bug - still in dvpt · c7b23f47
  NADAL Morgane authored 4 years ago
  
  c7b23f47
- working on hysteresis bug · 4a5d39df
  NADAL Morgane authored 4 years ago
  
  4a5d39df
May 20, 2020
- solved ellipsoid axes order issue · d8c384d3
  NADAL Morgane authored 4 years ago
  
  d8c384d3
May 18, 2020
- cleaning · 5ac30385
  NADAL Morgane authored 4 years ago
  
  5ac30385
- possibility to choose the boundaries for the histograms · 24399934
  NADAL Morgane authored 4 years ago
  
  24399934
- cleaning · 67980fc4
  NADAL Morgane authored 4 years ago
  
  67980fc4
May 14, 2020
- bugs correction · f0c8c483
  NADAL Morgane authored 4 years ago
  
  f0c8c483
- bugs correction · 8105237d
  NADAL Morgane authored 4 years ago
  
  8105237d
- errors correction - graph features extraction completed · 1c3e0601
  NADAL Morgane authored 4 years ago
  
  1c3e0601
May 12, 2020
- errors correction - graph features extraction completed · 8ca33894
  NADAL Morgane authored 4 years ago
  
  8ca33894
May 11, 2020
- curvature and torsion coorection + lengths of edges in micron · cb4c0cbb
  NADAL Morgane authored 4 years ago
  
  cb4c0cbb
- curvature and torsion done · d832a4a9
  NADAL Morgane authored 4 years ago
  
  d832a4a9
- working on - curvature and tension- - phi theta ellipsoid - · dd4f0d7e
  NADAL Morgane authored 4 years ago
  
  dd4f0d7e
May 07, 2020
- dealt with hysteresis pb + added features: · 6e2a11eb
  NADAL Morgane authored 4 years ago
  
  * ellipsoid axes sorted in croissant order * other parameters adjusted
  6e2a11eb
- dealt with hysteresis pb + added features: · a09e72c6
  NADAL Morgane authored 4 years ago
  
  * ellipsoid axes sorted in croissant order * other parameters adjusted
  a09e72c6
May 05, 2020
- added hist lengths and thickness features · 1a094725
  NADAL Morgane authored 4 years ago
  
  1a094725
May 04, 2020
- pandas df + length in micron + reorganisation of the code · 8b57e569
  NADAL Morgane authored 4 years ago
  
  8b57e569
- pandas df + length in micron + reorganisation of the code · f4675835
  NADAL Morgane authored 4 years ago
  
  f4675835
Apr 30, 2020
- some corrections on features and functions · 45ff36f0
  NADAL Morgane authored 4 years ago
  
  45ff36f0
Apr 29, 2020
- improved extensions lengths hist · 4d255a79
  NADAL Morgane authored 4 years ago
  
  4d255a79
- added extensions lengths hist · d5f543e7
  NADAL Morgane authored 4 years ago
  
  d5f543e7
Apr 28, 2020
- more features on extensions · fd7eee67
  NADAL Morgane authored 4 years ago
  
  fd7eee67
- corrected some features · ca68c425
  NADAL Morgane authored 4 years ago
  
  ca68c425
- added some features · 09ae9de9
  NADAL Morgane authored 4 years ago
  
  09ae9de9
Apr 27, 2020
- some corrections · 57c59876
  NADAL Morgane authored 4 years ago
  
  57c59876
- best fitting ellipsoid for soma points · 174c0f74
  NADAL Morgane authored 4 years ago
  
  174c0f74
- added soma features (volume + working on best fitting ellipsoid axes) +... · 09937e58
  NADAL Morgane authored 4 years ago
  
  added soma features (volume + working on best fitting ellipsoid axes) + modified skl brick.edge algo to support None value for calculus of edge lengths
  09937e58
Apr 24, 2020
- tests frangi time and memory usage + frangi prms · 658a41a1
  NADAL Morgane authored 4 years ago
  
  658a41a1
Apr 23, 2020
- tests frangi time usage · d5cb64d0
  NADAL Morgane authored 4 years ago
  
  d5cb64d0
- changed __slots__ initialization · 306a2ae6
  NADAL Morgane authored 4 years ago
  
  306a2ae6
- changed __slots__ initialization · c2da34ac
  NADAL Morgane authored 4 years ago
  
  c2da34ac
Apr 22, 2020
- some corrections · 15c95e8f
  NADAL Morgane authored 4 years ago
  
  15c95e8f
Apr 20, 2020
- tests frangi3d skimage + python · c8b83d38
  NADAL Morgane authored 4 years ago
  
  c8b83d38
- possibility to use Dijkstra from skimage BUT time x 10 · 905b5135
  NADAL Morgane authored 4 years ago
  
  905b5135