Commits · 685f23fe572cfe8f747a0cceed869f6672a4b8cb · DEBREUVE Eric / NutriMorph

Jun 24, 2020
- modif · 685f23fe
  NADAL Morgane authored 4 years ago
  
  685f23fe
- some modifs + new prms · 4e8095db
  NADAL Morgane authored 4 years ago
  
  4e8095db
- dvpt of the statistical and clustering analysis algos · 365a513d
  NADAL Morgane authored 4 years ago
  
  365a513d
- added soma uid to feature df · 8f32100b
  NADAL Morgane authored 4 years ago
  
  8f32100b
Jun 23, 2020
- minor modifications · 2b2747d4
  NADAL Morgane authored 4 years ago
  
  2b2747d4
- change the output dataframe to ease statistical analysis · 999c0a99
  NADAL Morgane authored 4 years ago
  
  999c0a99
- improve interface & prms · 2a162674
  NADAL Morgane authored 4 years ago
  
  2a162674
- add try/except for better dvpt · ae39797d
  NADAL Morgane authored 4 years ago
  
  ae39797d
Jun 22, 2020

solved BIG BUG: tangency of extensions and connexions leading to... · 9f4cdf48

NADAL Morgane authored 4 years ago

solved BIG BUG: tangency of extensions and connexions leading to "deskeletonization" and sklgraph incoherence with python objects

9f4cdf48

Jun 17, 2020
- solved BUG: free ext in cell graph · 0ac4c20d
  NADAL Morgane authored 4 years ago
  
  0ac4c20d
Jun 15, 2020
- solved soma_volume/convex_hull_volume issue · 522209af
  NADAL Morgane authored 4 years ago
  
  522209af
- solved soma_volume/convex_hull_volume issue · d3df13f8
  NADAL Morgane authored 4 years ago
  
  d3df13f8
Jun 12, 2020
- Format update: NutriMorph can be run on a file or on multiple files within repositories · 62d76ae3
  NADAL Morgane authored 4 years ago
  
  62d76ae3
- update: prm differenciation mode in frangi --> indirect · 5256359b
  NADAL Morgane authored 4 years ago
  
  5256359b
- update frangi3D + gui interface for frangi parameter determination · 96b6aca5
  NADAL Morgane authored 4 years ago
  
  96b6aca5
- update: thinning after skeletonization in nutrimorph.py and skl_map.py · 986ed789
  NADAL Morgane authored 4 years ago
  
  986ed789
- small correction · 40ccd520
  NADAL Morgane authored 4 years ago
  
  40ccd520
Jun 11, 2020
- Annotated the whole Nutrimorph script, except specific fcts in Frangi, Dijkstra and SKLGraph. · d4054214
  NADAL Morgane authored 4 years ago
  
  d4054214
Jun 08, 2020
- some modifs · 4cadf915
  NADAL Morgane authored 4 years ago
  
  4cadf915
- delete too big somas · 5a3fbfdc
  NADAL Morgane authored 4 years ago
  
  + under dev: delete too big extensions
  5a3fbfdc
Jun 05, 2020
- solved hysteresis bug - still in dvpt · c7b23f47
  NADAL Morgane authored 4 years ago
  
  c7b23f47
- working on hysteresis bug · 4a5d39df
  NADAL Morgane authored 4 years ago
  
  4a5d39df
May 20, 2020
- solved ellipsoid axes order issue · d8c384d3
  NADAL Morgane authored 4 years ago
  
  d8c384d3
May 18, 2020
- cleaning · 5ac30385
  NADAL Morgane authored 4 years ago
  
  5ac30385
- possibility to choose the boundaries for the histograms · 24399934
  NADAL Morgane authored 4 years ago
  
  24399934
- cleaning · 67980fc4
  NADAL Morgane authored 4 years ago
  
  67980fc4
May 14, 2020
- bugs correction · f0c8c483
  NADAL Morgane authored 4 years ago
  
  f0c8c483
- bugs correction · 8105237d
  NADAL Morgane authored 4 years ago
  
  8105237d
- errors correction - graph features extraction completed · 1c3e0601
  NADAL Morgane authored 4 years ago
  
  1c3e0601
May 12, 2020
- errors correction - graph features extraction completed · 8ca33894
  NADAL Morgane authored 4 years ago
  
  8ca33894
May 11, 2020
- curvature and torsion coorection + lengths of edges in micron · cb4c0cbb
  NADAL Morgane authored 4 years ago
  
  cb4c0cbb
- curvature and torsion done · d832a4a9
  NADAL Morgane authored 4 years ago
  
  d832a4a9
- working on - curvature and tension- - phi theta ellipsoid - · dd4f0d7e
  NADAL Morgane authored 4 years ago
  
  dd4f0d7e
May 07, 2020
- dealt with hysteresis pb + added features: · 6e2a11eb
  NADAL Morgane authored 4 years ago
  
  * ellipsoid axes sorted in croissant order * other parameters adjusted
  6e2a11eb
- dealt with hysteresis pb + added features: · a09e72c6
  NADAL Morgane authored 4 years ago
  
  * ellipsoid axes sorted in croissant order * other parameters adjusted
  a09e72c6
May 05, 2020
- added hist lengths and thickness features · 1a094725
  NADAL Morgane authored 4 years ago
  
  1a094725
May 04, 2020
- pandas df + length in micron + reorganisation of the code · 8b57e569
  NADAL Morgane authored 4 years ago
  
  8b57e569
- pandas df + length in micron + reorganisation of the code · f4675835
  NADAL Morgane authored 4 years ago
  
  f4675835
Apr 30, 2020
- some corrections on features and functions · 45ff36f0
  NADAL Morgane authored 4 years ago
  
  45ff36f0
Apr 29, 2020
- improved extensions lengths hist · 4d255a79
  NADAL Morgane authored 4 years ago
  
  4d255a79