- documentation updating
- correct bad behavior of ReconstructionParameters.is_normalization_equal() when intensity_transformation is None

- documentation updating
- pursued code splitting into astec/ascidian repositories
- documentation splitting into astec/ascidian

version 2.0.0
- moved ascidian algorithms/binaries to a dedicated git repository
- replaced pkg_resources by importlib.metadata
- added test infrastructure
- refactor setup.py (adding setup.cfg)

version 1.7.2
- review of conda env files (*.yaml) and build
- use bultin which command instead of external process to launch astec binaries
- removed obsolete python-3.7 builds, added python-3.10 and python-3.11

version 1.7.1
- Write embryo as a graph
- Computation of symmetric cells
- Allows to extract any XZ-section(s) at the fusion stage.

- Fusion of one single time point: allows longer suffixes than recognized image extensions.
- Pre-processed images
  are no more stored into ``.../SEG/SEG_XXX/RECONSTRUCTION/`` but in their
  own directories ``.../REC-MEMBRANE/REC_XXX/`` and/or ``.../REC-SEED/REC_XXX/``
  and/or ``.../REC-MORPHOSNAKE/REC_XXX/``. They can be transformed by the
  motion compensation stage.
- User-provided outer contour images (to be stored in ``.../CONTOUR_/CONTOUR_XXX/``)
  can be used in image pre-processing.
- Properties computation computes cell lineage
  when it is not available.

documentation update

fusion: morphological opening of the MIP image to crop the acquisition data

- write/update documentation for astec_atlas_init_naming and astec_atlas_naming
- add assessment measure for initial naming

Allows fusion with only a subset of acquisition images

add utility to name one time point of an unnamed embryo from
a set of named atlases (astec_atlas_init_naming)

- add missing package in pkg/recipe/meta.yaml

allows .h5.gz images as camera acquisition images

get the package version number from conda, and write it in the history log

allow cropping along the Z direction for fusion

Release 1.2.0

Dedicated I/O for morphonet information

Update documentation. Update figure generation

Add documentation for cell naming and atlas analysis

Evolution of cell naming procedures and atlas analysing