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Various fixes to improve portability of documentation_iros branch

@akrupa and @asengupt Here some changes that may help

There remain a change that is needed on my side in the main CMakeLists.txt file:

#add_subdirectory(InterfaceWithRobot)

that is not commited and need to be fixed. Without commenting this line, I have the following issue:

CMake Error at /Users/fspindle/soft/agniva-deformation-tracking/deformationtracking/InterfaceWithRobot/CMakeLists.txt:11 (find_package):
  By not providing "FindManagerApp.cmake" in CMAKE_MODULE_PATH this project
  has asked CMake to find a package configuration file provided by
  "ManagerApp", but CMake did not find one.

  Could not find a package configuration file provided by "ManagerApp" with
  any of the following names:

    ManagerAppConfig.cmake
    managerapp-config.cmake

  Add the installation prefix of "ManagerApp" to CMAKE_PREFIX_PATH or set
  "ManagerApp_DIR" to a directory containing one of the above files.  If
  "ManagerApp" provides a separate development package or SDK, be sure it has
  been installed.

Some suggestions:

  • there are so much branches that we don't know which one to use
  • if documentation_iros is the up to date version, please merge this branch into master branch
  • master branch should be always the branch to use with bug fixes improvements
  • if you have time, it could be nice to fix the thousand of warnings (or some of them) in this project

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