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  • vidjilvidjil
  • Issues

  • Open 98
  • Closed 76
  • All 174
New issue
  • Priority Created date Last updated Milestone due date Due date Popularity Label priority Manual
  • Short name et VDJ/VDDJ : réduire le seuil de 6 ?
    #2789 · opened Nov 15, 2017 by Thonier Florian   bikeshedding client client-cloneList client-info client-responsive priority-1-low wont-fix
    • CLOSED
    • 11
    updated Aug 07, 2018
  • Less et couleurs en minuscules
    #2799 · opened Nov 17, 2017 by Mathieu Giraud   client-less-css priority-1-low
    • CLOSED
    • 1
    • 2
    updated Feb 05, 2019
  • URL: le plot preset devrait être correctement initialisé, ou au moins non initialisé à 0
    #2807 · opened Nov 18, 2017 by Mathieu Giraud   client-api priority-1-low
    • CLOSED
    • 1
    updated Nov 19, 2017
  • Séparation serveurs : app (html/js) // vda
    #1448 · opened Nov 29, 2016 by Vidjil Team   !-reflexion priority-1-low server server-hosting server-upload
    • CLOSED (MOVED)
    • 0
    updated Nov 22, 2017
  • Expiration des fichiers .fasta
    #1098 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-reflexion priority-1-low server-hosting server-smtp
    • CLOSED
    • 0
    updated Nov 22, 2017
  • Récupérer des données par FTP/HTTP ou autre
    #1475 · opened Nov 29, 2016 by Vidjil Team   priority-1-low server server-hosting server-integration server-upload
    • CLOSED
    • 1
    updated Nov 22, 2017
  • TEST_TAP_EQUAL pour les tests unitaires
    #2919 · opened Nov 30, 2017 by Mathieu Giraud   *-go cpp dev-tests priority-1-low
    • CLOSED
    • 0
    updated Jan 17, 2018
  • Raisons de non-segmentation : remettre à plat, documenter ?
    #1273 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug !-reflexion cpp-heuristic priority-1-low
    • CLOSED
    • 0
    updated Nov 21, 2019
  • Le calcul de la e-valeur devrait prendre en compte le -t
    #1604 · opened Nov 29, 2016 by Vidjil Team   bio-e-value cpp-heuristic priority-1-low wont-fix
    • CLOSED
    • 1
    updated Apr 10, 2018
  • germline/germlines.data: trouver un format utile, l'utiliser un peu partout
    #1012 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard bio-germlines cpp priority-1-low repseq-standardization
    • CLOSED
    • 0
    updated Dec 04, 2017
  • Automatiser création pseudo-germlines, en particulier Dd2-Dd3, get-germline incomplet
    #973 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-germlines priority-1-low
    • CLOSED
    • 0
    updated Dec 04, 2017
  • Réécrire les tests unitaires avec TEST_TAP_EQUAL
    #2989 · opened Jan 17, 2018 by Mathieu Giraud   Algo 2017.11   *-go cpp dev-tests priority-1-low
    • CLOSED
    • 1
    updated Jan 30, 2018
  • Faire un mock pour window pour les tests QUnit bidouillant l'url
    #2221 · opened Mar 07, 2017 by Mathieu Giraud   client client-api dev-tests priority-1-low
    • CLOSED
    • 0
    updated Feb 23, 2018
  • Génération du JSON : l'espace mémoire augmente de 50% à la fin de Vidjil
    #2120 · opened Jan 20, 2017 by Mikaël Salson   json-export   cpp cpp-mem priority-1-low
    • CLOSED
    • 35
    updated Mar 22, 2019
  • La génération du JSON peut allouer 1 GB de mémoire à la fin de vidjil-algo
    #3395 · opened Jul 18, 2018 by Mathieu Giraud   cpp cpp-mem priority-1-low
    • CLOSED
    • 1
    • 1
    updated Oct 17, 2018
  • Colorer l'icône de tag multiple lorsque c'est pertinent
    #3689 · opened Jan 22, 2019 by Mathieu Giraud   client client-ergonomy priority-1-low
    • CLOSED
    • 1
    • 1
    updated Feb 11, 2019
  • Afficher des informations sur tout clone
    #3989 · opened Oct 01, 2019 by Mathieu Giraud   client priority-1-low
    • CLOSED
    • 1
    • 2
    updated Nov 04, 2019
  • Présence de séquences dans le segmenter : uniquement has_sequence ?
    #4008 · opened Oct 16, 2019 by Mathieu Giraud   client-segmenter priority-1-low
    • CLOSED
    • 1
    updated Oct 23, 2019
  • Retour quand erreur à la création de compte
    #4053 · opened Nov 15, 2019 by Mathieu Giraud   priority-1-low server server-admin
    • CLOSED
    • 1
    updated Nov 15, 2019
  • Axes, colonnes, pretty, fillAxisBox et DOM
    #2436 · opened May 12, 2017 by Mathieu Giraud   client client-axis client-axis-columns priority-1-low
    • CLOSED
    • 1
    • 2
    updated May 31, 2017
  • Tagguer le IGH D7-27-0/92/0-J1 non recombiné d'une manière particulière
    #2232 · opened Mar 09, 2017 by Mathieu Giraud   Algo 2018.08   Paris-Pitié bio-analyze-more bio-primers cpp priority-1-low
    • CLOSED
    • 1
    • 5
    updated Nov 21, 2019
  • should-to-tap: Ne pas faire la shell-expansion sur la ligne "Launching"
    #2183 · opened Feb 14, 2017 by Mathieu Giraud   dev-tests dev-tests-should-get priority-1-low
    • CLOSED
    • 2
    updated Apr 18, 2018
  • Faire au moins un test avec souris et rat
    #2180 · opened Feb 14, 2017 by Mathieu Giraud   Algo 2017.03   bio-species cpp dev-tests priority-1-low
    • CLOSED
    • 1
    updated Feb 15, 2017
  • Vidjil morning : le mettre dans les scripts d'install
    #1831 · opened Nov 29, 2016 by Vidjil Team   priority-1-low server-admin server-monitor
    • CLOSED
    • 1
    updated Oct 27, 2017
  • Vidjil morning : /etc/update-motd.d/50-landscape-sysinfo
    #1830 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-1-low server-admin server-monitor
    • CLOSED
    • 1
    updated Apr 16, 2018
  • Génération de données simulées
    #1776 · opened Nov 29, 2016 by Vidjil Team   old_tracker com-paper priority-1-low
    • CLOSED (MOVED)
    • 0
    updated Apr 16, 2018
  • Vidjil-all-slaves directement après coverage ?
    #1620 · opened Nov 29, 2016 by Vidjil Team   old_tracker dev-ci dev-tests priority-1-low
    • CLOSED
    • 1
    updated Mar 05, 2019
  • Makefile: ne pas regénérer vidjil et align.cgi quand pas besoin
    #1583 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Nettoyage des fausses dates
    #1568 · opened Nov 29, 2016 by Vidjil Team   old_tracker data priority-1-low
    • CLOSED
    • 1
    updated Nov 20, 2018
  • should_get : * est parfois shell-étendu
    #1529 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug dev-tests-should-get priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Color by locus
    #1516 · opened Nov 29, 2016 by Vidjil Team   old_tracker client priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Se passer de org-babel-tangle ?
    #1444 · opened Nov 29, 2016 by Vidjil Team   old_tracker dev-tests priority-1-low wont-fix
    • CLOSED
    • 0
    updated Nov 29, 2016
  • fuse.py n'arrive plus a fusionner des fichier clntab et vidjil
    #1433 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug priority-1-low server-fuse
    • CLOSED
    • 1
    updated May 18, 2017
  • algo/tools: réparer cut.cpp
    #1401 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp dev-dead-code priority-1-low
    • CLOSED
    • 1
    updated Aug 28, 2017
  • noms des fichiers .data et .analysis exportés
    #1338 · opened Nov 29, 2016 by Vidjil Team   old_tracker #-privacy *-go priority-1-low sub
    • CLOSED
    • 0
    updated Feb 01, 2017
  • nom du fichier .csv
    #1337 · opened Nov 29, 2016 by Vidjil Team   old_tracker #-privacy *-go priority-1-low sub
    • CLOSED
    • 0
    updated Feb 01, 2017
  • (et le backdoor du search, mais ok)
    #1336 · opened Nov 29, 2016 by Vidjil Team   old_tracker #-privacy *-go priority-1-low sub
    • CLOSED
    • 1
    updated Feb 01, 2017
  • export pdf
    #1335 · opened Nov 29, 2016 by Vidjil Team   old_tracker #-privacy *-go priority-1-low sub
    • CLOSED
    • 1
    updated Feb 01, 2017
  • page des fichiers fasta d'un patient
    #1334 · opened Nov 29, 2016 by Vidjil Team   old_tracker #-privacy *-go priority-1-low sub
    • CLOSED
    • 0
    updated Feb 01, 2017
  • nom du patient transféré dans le .analysis (et affiché dans le info)
    #1333 · opened Nov 29, 2016 by Vidjil Team   old_tracker #-privacy *-go priority-1-low sub
    • CLOSED
    • 0
    updated Feb 01, 2017
  • Anonymisation : il reste quelques endroits en clair
    #1332 · opened Nov 29, 2016 by Vidjil Team   old_tracker #-privacy *-go priority-1-low
    • CLOSED
    • 1
    updated Feb 01, 2017
  • admin: dans la table "user list", voir quelques détails
    #1313 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Petits clones qui frétillent
    #1300 · opened Nov 29, 2016 by Vidjil Team   old_tracker client-grid client-ugly priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Réuploader un fichier garde le nom d'origine
    #1264 · opened Nov 29, 2016 by Vidjil Team   !-reflexion priority-1-low server-database
    • CLOSED
    • 1
    updated Jan 05, 2017
  • warnings par mail si cela baisse ?
    #1259 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-control dev-robust priority-1-low server-compare-last-results sub
    • CLOSED
    • 1
    updated Nov 20, 2018
  • accepter si on segmente des reads en plus
    #1258 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-control dev-robust priority-1-low server-compare-last-results sub
    • CLOSED
    • 1
    updated Nov 20, 2018
  • Clones sans representative ?
    #1167 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp-representative dev-dead-code dev-refactor priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Le lancement de fuse.py devrait être configurable dans la config
    #1145 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-database priority-1-low server-database server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • On ne voit plus le bas du graph
    #1140 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client-graph priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Il ne semble pas y avoir de message d'erreur lorsque l'upload ne fonctionne pas
    #1109 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague client-database priority-1-low server-upload
    • CLOSED
    • 1
    updated Jan 11, 2017
  • « Add file » ne fonctionne pas toujours/pas tout de suite lorsqu'on est en train d'uploader un fichier sour FF 32
    #1106 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague client-database priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Nettoyage suite au déplacement de l'aide (bougée vers doc/browser.org)
    #1094 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague client-database priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Investigate code coverage for C++ codebase
    #1084 · opened Nov 29, 2016 by Vidjil Team   old_tracker dev-ci dev-tests priority-1-low sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Couverture de code
    #1083 · opened Nov 29, 2016 by Vidjil Team   old_tracker dev-ci dev-tests priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • model.js devrait faire moins de 2000 lignes :)
    #1082 · opened Nov 29, 2016 by Vidjil Team   old_tracker client dev-refactor priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Changer les boutons info/edit de place
    #1075 · opened Nov 29, 2016 by Vidjil Team   old_tracker client-ergonomy priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Désélectionner un analysis_file dans le 'import analysis'
    #1047 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Récupérer l'exception si conf.js spécifie des fichiers inexistants
    #1045 · opened Nov 29, 2016 by Vidjil Team   old_tracker client priority-1-low
    • CLOSED
    • 2
    updated Oct 19, 2018
  • Tests .should-get ne concernant pas l'algo
    #1030 · opened Nov 29, 2016 by Vidjil Team   old_tracker dev-tests dev-tests-should-get priority-1-low
    • CLOSED
    • 1
    updated May 18, 2017
  • Épaisseur de la police
    #1015 · opened Nov 29, 2016 by Vidjil Team   client client-design client-ergonomy client-less-css priority-1-low
    • CLOSED
    • 0
    updated Nov 15, 2017
  • interesting substrings: permettre d'avoir une (ou une liste de) chaîne(s) intéressantes qui ne seront pas supprimées
    #1004 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-1-low server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • dynprog: Gotoh / gaps multiples
    #1002 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp-dynprog priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Align puis ajout autre seqs: complètement décalées
    #1001 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client-segmenter priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Séquences manquantes
    #997 · opened Nov 29, 2016 by Vidjil Team   old_tracker client feature priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Surligner la ligne survolée dans l'aligneur
    #992 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-segmenter feature priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Déselection des clones dans l'aligneur
    #991 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-segmenter priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Fusionner plusieurs germline avec fuse.py
    #983 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug bio-germlines priority-1-low server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • alertes à l'utilisateur en fonction de certaines raisons de non-segmentation
    #981 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-control client client-warning cpp-heuristic priority-1-low
    • CLOSED
    • 1
    updated Nov 20, 2018
  • .vdj : inclure (IMGT-)CDR3 ?
    #950 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-reflexion cpp priority-1-low repseq-standardization
    • CLOSED
    • 0
    updated Nov 29, 2016
  • vidjil.cpp: .json doit avoir les même limites que stdout
    #929 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp priority-1-low
    • CLOSED
    • 1
    updated Sep 12, 2017
  • Traitement des options : supprimer docopt, choisir autre solution
    #926 · opened Nov 29, 2016 by Vidjil Team   Algo 2017.11   !-hard cpp cpp-compiler cpp-options priority-1-low
    • CLOSED
    • 1
    • 8
    updated Oct 19, 2017
  • chasse aux pixels
    #923 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague client client-ergonomy client-less-css priority-1-low
    • CLOSED
    • 0
    updated Nov 20, 2018
  • body-block
    #913 · opened Nov 29, 2016 by Vidjil Team   !!-bug *-go *-too-vague client client-grid priority-1-low
    • CLOSED
    • 2
    updated Apr 11, 2017
  • bouton play
    #905 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-graph feature priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • ... sauf celles qui sont déjà mises ailleurs ? (nom/prénom/birth/id)
    #890 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague client client-export priority-1-low sub
    • CLOSED
    • 1
    updated Apr 12, 2017
  • Exporter toutes les infos...
    #889 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague client client-export priority-1-low sub
    • CLOSED
    • 1
    updated Apr 12, 2017