Issues · vidjil / vidjil

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Des e-valeurs sont supérieures à 1

#1607 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go bio-e-value client cpp-heuristic priority-1-low
- 0
updated May 22, 2017
Plot submenu: pas lisible sous Safari

#1374 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-grid priority-2
- 0
updated Nov 21, 2017
Légende sur l'export svg

#1951 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export feature priority-2
- 0
updated May 22, 2017
Changer germline/genes : voir changements de stats induits

#1616 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go bio-control client feature priority-3-month
- 0
updated May 22, 2017
Liste des sets : info si les calculs sont finis ou pas

#1520 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go server-database server-ergonomy server-task.py
- 0
updated Feb 28, 2019
ajouter les tests fonctionnels dans make release_browser

#1443 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go dev-ci dev-tests dev-tests-watir priority-2
- 0
updated Nov 18, 2017
Graîne pour xxx

#1915 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug bio-germlines-pseudo cpp-heuristic priority-3-month
- 0
updated Jul 05, 2017
.segEdited dans model_loader:442

#1645 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client priority-2
- 0
updated Jul 05, 2017
Revoir la liste dans germline.js

#1609 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug bio-germlines priority-2
- 0
updated Jul 05, 2017
test.data : faire un nouveau fichier

#1164 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client data dev-tests priority-2
- 0
updated Jul 05, 2017
VidjilFieldExtractor, extract : positions 5/4/3

#1836 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-4-week repseq-mixcr repseq-platform
- 0
updated Jul 05, 2017
Gary

#1798 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp-finesegmenter priority-4-week
- 0
updated Jul 05, 2017
DDJ en TRD+ / kmers 4 écrasent 5

#1692 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-analyze-more bio-germlines dev-tests-curated-vdj priority-4-week
- 0
updated Jul 05, 2017
Heuristique i.0 : être capable d'inférer des germlines "inconnus"

#1400 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important !-reflexion LON-Jack PAN-Necker bio-capture bio-germlines-pseudo cpp-heuristic feature priority-2
- 0
updated Jul 05, 2017
SortMeVDJ

#1515 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp feature priority-2
- 0
updated Jul 10, 2017
Pouvoir facilement faire un 'compare' sur toutes les configs d'un même patient

#1510 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-ergonomy priority-2 server-compare-samples
- 0
updated Oct 23, 2017
Interdire les 'compare patients' avec plus de 10 fichiers

#1509 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client priority-2 server-compare-samples
- 0
updated Oct 23, 2017
Raccourci clavier : shift-N pour normalisation

#1375 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-keyboard client-normalization feature priority-2
- 0
updated Oct 23, 2017
Pas de code dépendant de la germline dans clone.js / model.js

#1314 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client priority-2
- 0
updated Oct 23, 2017
Voir les infos du fichier .analysis

#1149 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client priority-2
- 0
updated Oct 23, 2017
Identifiant patient de l'hôpital dans le #info

#1138 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client client-database client-export client-rapport priority-2 server-database
- 0
updated Oct 23, 2017
message d'erreur si ne passe pas

#1079 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client dev-robust priority-3-month sub
- 0
updated Oct 23, 2017
tester surtout les versions d'IE

#1078 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client dev-robust priority-3-month sub
- 0
updated Oct 23, 2017
Supervision / monitor externe flexible pour déploiement autres serveurs

#1811 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-3-month server-admin server-hosting
- 0
updated Nov 22, 2017
mapper les windows les moins abondantes sur les plus abondantes

#943 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion cpp
- 0
updated Nov 23, 2017
Jenkins : relancer Vidjil-data si changement dans le git dans germline/

#1234 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-germlines dev-ci wont-fix
- 0
updated Jan 22, 2020
Fichier .analysis sur une seule partie des fichiers

#2026 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug !-reflexion priority-4-week server server-sample-sets
- 0
updated Mar 14, 2017
Lorsqu'on affiche les données d'un run, les courbes sont affichées (et séparées) par date

#2017 · opened Nov 29, 2016 by Vidjil Team old_tracker LIL-Lille client-ergonomy client-graph priority-2
- 0
updated Nov 29, 2016
should-to-tap.sh / should-vdi-to-tap.py : option verbose, -v/-vv ?

#2012 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-tests priority-2
- 0
updated Nov 29, 2016
Export Krona pour la visualisation du répertoire

#1995 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion PAN-Necker client-export priority-1-low
- 0
updated Nov 29, 2016
Supprimer le calcul de matrice de similarité dans l'algo

#1990 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp priority-3-month
- 0
updated May 26, 2020
Affichage des logs du serveur web

#1986 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-robust priority-2 server
- 0
updated Nov 29, 2016
Sortir la séquence consensus complète en donnant un histogramme de la représentativité (à la JalView)

#1972 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion Paris-Pitié cpp-representative feature priority-2
- 0
updated Jun 25, 2018
e-values .vidjil sont celles du Kmer, pas du Fine

#1964 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-e-value cpp cpp-heuristic priority-3-month
- 0
updated Sep 16, 2019
Les D multiples ne sont pas colorés dans les rapports, factoriser colorisation séquence

#1963 · opened Nov 29, 2016 by Vidjil Team old_tracker PAR-Debré client-rapport cpp-finesegmenter-D
- 0
updated Nov 23, 2019
Trouver une autre méthode de scheduling, indépendante de web2py

#1950 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-reflexion priority-3-month server server-task.py
- 0
updated Nov 29, 2016
"import analysis" s'il n'y a rien de chargé devrait être désactivé (ou erreur)

#1938 · opened Nov 29, 2016 by Vidjil Team old_tracker client priority-2
- 0
updated Nov 29, 2016
Véracité des causes de non segmentation (et implications du -t ou -2)

#1936 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug bio-CLL bio-trim client-info cpp-heuristic priority-3-month
- 0
updated Dec 06, 2016
Tout ce qui est dans task.py devrait être lancé par un autre utilisateur

#1930 · opened Nov 29, 2016 by Vidjil Team old_tracker !-security priority-3-month server server-pre-process server-task.py
- 0
updated Dec 08, 2016
Le bouton back n'est pas toujours intuitif

#1911 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2
- 0
updated Nov 29, 2016
evalues > 1

#1889 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug bio-e-value cpp-heuristic priority-3-month
- 1
updated Sep 16, 2019
Color by DBScan

#1860 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion client dev-dead-code priority-2
- 0
updated Nov 29, 2016
"upload list" : mettre "uploading icon-spin4" tant qu'il y a des uploads en cours

#1850 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2
- 0
updated Nov 29, 2016
Icones, jenkins et autres

#1848 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-build priority-2
- 0
updated Nov 29, 2016
Mieux packager les releases algo, README

#1845 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2
- 0
updated Nov 29, 2016
imseq

#1842 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 repseq-platform
- 0
updated Nov 29, 2016
MiXCR : compilation, tests

#1838 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 repseq-mixcr repseq-platform
- 0
updated Nov 29, 2016
Meilleur monitoring

#1832 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-1-low server-admin server-monitor
- 0
updated Nov 29, 2016
Mieux comprendre IMGT/JunctionAnalysis

#1819 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 repseq-IMGT
- 0
updated Jun 05, 2019
Ne pas afficher "smaller clones" quand il n'y en a pas

#1809 · opened Nov 29, 2016 by Vidjil Team old_tracker client priority-2
- 0
updated Nov 29, 2016
should-vdj-to-tap.py: meilleur diff, détailler l'échec

#1800 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-tests feature priority-2
- 0
updated Nov 29, 2016
VDDJ et overlap

#1793 · opened Nov 29, 2016 by Vidjil Team old_tracker PAN-Necker cpp-finesegmenter priority-2
- 0
updated Nov 29, 2016
VDDJ et sortie json

#1792 · opened Nov 29, 2016 by Vidjil Team old_tracker PAN-Necker cpp-finesegmenter priority-2 repseq-formats
- 0
updated Nov 29, 2016
Server error sur URL mal formée

#1789 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-2 server
- 0
updated Nov 29, 2016
Export ou import VDJtools

#1785 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 repseq-formats
- 0
updated Nov 29, 2016
Indice/index de clonalité, diversité, options et clustérisation

#1782 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-control bio-diversity cpp cpp-cluster priority-2
- 0
updated Nov 29, 2016
Diagramme de Venn et log-log

#1778 · opened Nov 29, 2016 by Vidjil Team old_tracker client client-log-log feature priority-2
- 0
updated Mar 21, 2019
Nomenclature originale, PMC2706371

#1764 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 repseq-standardization
- 0
updated Nov 29, 2016
retrieve and display in a drop-list all .analysis who share at least one sample with the currently diplayed sample_set

#1762 · opened Nov 29, 2016 by Vidjil Team old_tracker client priority-3-month server
- 0
updated Nov 29, 2016
Une séquence ambiguë à tort ? -4

#1760 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-germlines-pseudo cpp-heuristic priority-1-low
- 0
updated Feb 04, 2017
Select All / Exporter tous les clones

#1754 · opened Nov 29, 2016 by Vidjil Team old_tracker client-ergonomy client-export feature priority-2
- 0
updated Jan 18, 2019
Collaboration Montréal

#1750 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-species priority-2
- 0
updated Jan 24, 2017
Clustering par similarité

#1749 · opened Nov 29, 2016 by Vidjil Team old_tracker client
- 0
updated Nov 30, 2016
Charger / Sauver les .analysis dans des vues autres que Patient

#1746 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-reflexion BRU-Bruxelles priority-3-month
- 0
updated Nov 29, 2016
Rajouter de la doc pour pré-processing, check qualité...

#1743 · opened Nov 29, 2016 by Vidjil Team old_tracker doc priority-2
- 0
updated Nov 29, 2016
Documenter backup.sh + mettre le script distant dans le git

#1737 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-robust priority-2
- 0
updated Nov 29, 2016
Conserver la notification actuelle lors de la suppression d'une notification

#1734 · opened Nov 29, 2016 by Vidjil Team old_tracker client-notifications priority-1-low
- 0
updated Nov 09, 2017
TRA+D, gènes V communs A/D, VDJ ou VJ

#1729 · opened Nov 29, 2016 by Vidjil Team old_tracker
- 0
updated Nov 30, 2016
Sauvegarde du tri de la liste des patients

#1721 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-1-low
- 0
updated Nov 29, 2016
installation via binaire statique et doc/algo.org

#1720 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-build doc priority-2
- 0
updated Nov 29, 2016
Analyse en profondeur du comportement du DAL web2py

#1719 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-1-low server-database server-speed
- 0
updated Jan 25, 2017
Aucune config sélectionnée par défaut

#1715 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-2 server server-config
- 0
updated Nov 29, 2016
Envoyer des séquences à Arrest : plus joli

#1710 · opened Nov 29, 2016 by Vidjil Team old_tracker client client-export priority-2
- 0
updated Nov 29, 2016
0914-pap-IGH+.should-vdj.fa

#1708 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-1-low
- 0
updated Nov 29, 2016
Bug : multi selection dans le barplot alors que la touche maj n'est pas utilisée

#1707 · opened Nov 29, 2016 by Vidjil Team old_tracker client
- 1
updated Nov 20, 2018
Dans la table "config", afficher le nombre de runs lancés avec chaque config

#1701 · opened Nov 29, 2016 by Vidjil Team old_tracker client-database priority-2 server-database
- 0
updated Nov 29, 2016
Générer des .fa.gz pour les gros get_reads

#1699 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp priority-1-low
- 0
updated Nov 29, 2016
Bug d'affichage quand le focus sur un clone (% en bas à droite) est très long

#1694 · opened Nov 29, 2016 by Vidjil Team old_tracker client client-ugly priority-3-month
- 2
updated Nov 21, 2018
Export fasta: afficher d'une certaine manière les bases enlevées sur la germline

#1680 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion *-too-vague client-export priority-3-month
- 0
updated Nov 29, 2016
Séparateurs milliers/décimal

#1676 · opened Nov 29, 2016 by Vidjil Team old_tracker client client-i18n priority-1-low wont-fix
- 0
updated Nov 29, 2016
Colinéaire génome : test sur tout le génome ?

#1664 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-analyze-more bio-control dev-tests priority-3-month
- 1
updated Nov 26, 2019
notable/shared-brussels.fa et -t 100

#1663 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-trim dev-tests priority-2
- 0
updated Nov 29, 2016
extract_basename est Unix-dépendant

#1656 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp wont-fix
- 0
updated Nov 30, 2016
Être cohérent sur le clone coverage affiché

#1655 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-grid priority-2
- 0
updated Nov 29, 2016
Ne proposer que des presets qui ont du sens

#1654 · opened Nov 29, 2016 by Vidjil Team old_tracker client-grid priority-2
- 0
updated Nov 29, 2016
small_example.html ne fonctionne pas sous FF et Chrome

#1652 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug dev-tests priority-2
- 0
updated Nov 29, 2016
Estimer K/lambda pour le FineSegmenter: ALP ?

#1651 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-control bio-e-value cpp-dynprog cpp-finesegmenter cpp-finesegmenter-D math-stats priority-3-month
- 1
updated Nov 29, 2017
Convention_de_codage ou ConventionDeCodage ?

#1650 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp dev-policy priority-1-low
- 0
updated Dec 02, 2019
Le select « color by » est mal placé (décalé vers le bas) sous Windows/Chrome

#1648 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client client-menu priority-2
- 0
updated Nov 29, 2016
Changer germline/gens : marqueur visuel/dynamique

#1643 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion
- 0
updated Nov 30, 2016
Replicats pour gommer des erreurs de PCR/séquençage

#1638 · opened Nov 29, 2016 by Vidjil Team old_tracker Paris-Pitié bio-control feature priority-2
- 0
updated Nov 29, 2016
day after first sample déclenché de manière trop rapide ?

#1637 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client priority-2
- 0
updated Nov 29, 2016
patient/stats ne retourne pas forcément le bon fichier fused

#1632 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug app-stats priority-4-week
- 0
updated Feb 09, 2018
export anaylsis : fichier sans le nom du patient/fichier original

#1624 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug
- 0
updated Nov 30, 2016
Mettre en place la config vidjil-dev, qui lance release-candidate

#1612 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-3-month
- 0
updated Nov 29, 2016
python, import et modules

#1608 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 server-fuse
- 0
updated Nov 29, 2016
Versions longues des gènes

#1600 · opened Nov 29, 2016 by Vidjil Team old_tracker LIL-Lille bio-analyze-more priority-3-month
- 0
updated Nov 29, 2016
e-valeur et arguments de getProbabilityAtLeastOrAbove() dans getMaximum

#1598 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-e-value cpp priority-2
- 0
updated Nov 29, 2016
L'estimation du nombre de séquences est fausse pour un .gz

#1596 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug bio-control priority-3-month
- 0
updated Jul 06, 2018
segmenter.h/c: rationaliser les attributs d'information

#1592 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp-heuristic dev-policy priority-2
- 0
updated Nov 29, 2016