Issues · vidjil / vidjil · GitLab

Interacting with RepSeq software

#5 · opened Nov 24, 2016 by Mathieu Giraud +-roadmap repseq-community repseq-formats repseq-platform repseq-standardization server-pre-process
- CLOSED
- 1
updated Apr 03, 2019
Extend normalization with custom normalized_reads

#3645 · opened Nov 30, 2018 by Mathieu Giraud *-go Boldrini-Brasil client repseq-formats
- CLOSED
- 5
updated Dec 28, 2018
Labels should be stored in the fused file

#3585 · opened Oct 23, 2018 by Mikaël Salson *-go repseq-formats server-fuse user-request
- CLOSED
- 1
- 1
updated Dec 04, 2018
Utilisation du format AIRR

#3457 · opened Jul 23, 2018 by Mathieu Giraud Algo 2018.09 !-important repseq-community repseq-formats repseq-formats-airr repseq-platform
- CLOSED
- 14
updated Nov 20, 2018
AIRR et nombre de reads : finalement duplicate_count ?

#3590 · opened Oct 24, 2018 by Mathieu Giraud bikeshedding repseq-formats repseq-formats-airr
- CLOSED
- 4
updated Oct 24, 2018
Export csv AIRR depuis l'algo

#2828 · opened Nov 21, 2017 by Mathieu Giraud Algo 2018.09 Oct 27, 2018 client-export cpp cpp-export repseq-community repseq-formats repseq-formats-airr repseq-platform user-request
- CLOSED
- 8
updated Oct 24, 2018
Format pour transmettre les barplots widgets

#3451 · opened Sep 11, 2018 by Mathieu Giraud repseq-formats server-qc-stats
- CLOSED
- 0
updated Oct 08, 2018
Tracer la version de germlines utilisée dans l'algo

#2155 · opened Feb 01, 2017 by Mathieu Giraud Algo 2017.03 #-vodooj bio-control cpp repseq-formats
- CLOSED
- 1
- 1
updated Sep 07, 2018
Mieux tester les champs critiques de la sortie .vidjil

#1813 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp dev-tests priority-2 repseq-formats
- CLOSED
- 1
updated Apr 16, 2018
Interaction avec bioinfos durant le workshop

#2798 · opened Nov 17, 2017 by Mathieu Giraud Web 2017.11 client-api com-vw-vidjil-workshop repseq-formats repseq-platform server-api
- CLOSED
- 1
updated Nov 29, 2017
traduire en AA

#1372 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important bio-AA cpp feature priority-3-month repseq-formats sub
- CLOSED
- 0
updated Nov 23, 2017
Les valeurs 5end et 4end dans .vidjil devraient être basées sur 1 / 1-based

#1869 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-segmenter cpp priority-5-today repseq-formats
- CLOSED
- 0
updated Oct 21, 2017
Les valeurs seg.5/4/3 sont désormais basées sur 1 : mettre à jour le browser

#1958 · opened Nov 29, 2016 by Vidjil Team old_tracker client priority-5-today repseq-formats
- CLOSED
- 0
updated Sep 25, 2017
Faire marcher 'algo/tools' avec la réorganisation Fasta/BAM

#2551 · opened Jul 07, 2017 by Mathieu Giraud dev-refactor repseq-formats
- CLOSED
- 1
- 4
updated Aug 28, 2017
c++: détection CDR3: Cys, Phe/Trp + séquence en AA

#1369 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important bio-AA cpp feature priority-3-month repseq-formats
- CLOSED
- 0
updated Jul 10, 2017
Tests .should-vdj: format ?

#1678 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion collaboration dev-tests priority-4-week repseq-formats
- CLOSED
- 0
updated Jul 10, 2017
Charger des fichiers BAM

#2016 · opened Nov 29, 2016 by Vidjil Team Algo 2017.07 +-merge LIL-Lille cpp feature priority-2 repseq-formats sequencers-Ion
- CLOSED
- 1
- 17
updated Jul 07, 2017
Sauvegarder et utiliser l'id des samples dans les fichiers .analysis

#2176 · opened Feb 09, 2017 by Thonier Florian Web 2017.05 !!-bug !-important *-go +-deploy REN-Rennes client-database client-graph priority-4-week repseq-formats
- CLOSED
- 18
updated May 18, 2017
`-y all`: on devrait avoir les séquences consensus dans `.vdj.fa`

#2239 · opened Mar 09, 2017 by Mathieu Giraud Algo 2017.03 !!-bug +-deploy Paris-Pitié cpp repseq-formats
- CLOSED
- 2
updated Mar 29, 2017
Ajout de séquence externe : séquences non segmentables

#2211 · opened Mar 02, 2017 by Mathieu Giraud +-working app-analyze cpp repseq-formats
- CLOSED
- 0
updated Mar 07, 2017