Issues · vidjil / vidjil · GitLab

Sauvegarder et utiliser l'id des samples dans les fichiers .analysis

#2176 · opened Feb 09, 2017 by Thonier Florian Web 2017.05 !!-bug !-important *-go +-deploy REN-Rennes client-database client-graph priority-4-week repseq-formats
- CLOSED
- 18
updated May 18, 2017
AIRR : ajouter des champs optionnels

#3569 · opened Oct 17, 2018 by Mathieu Giraud Algo 2019.05 repseq-formats repseq-formats-airr
- 5
updated Mar 14, 2019
Utilisation du format AIRR

#3457 · opened Jul 23, 2018 by Mathieu Giraud Algo 2018.09 !-important repseq-community repseq-formats repseq-formats-airr repseq-platform
- CLOSED
- 14
updated Nov 20, 2018
Mettre en json structué des infos pour l'instant dans le log

#3049 · opened Feb 09, 2018 by Mathieu Giraud json-export bio-control repseq-formats server-qc-stats
- 2
updated Oct 16, 2018
Export csv AIRR depuis l'algo

#2828 · opened Nov 21, 2017 by Mathieu Giraud Algo 2018.09 Oct 27, 2018 client-export cpp cpp-export repseq-community repseq-formats repseq-formats-airr repseq-platform user-request
- CLOSED
- 8
updated Oct 24, 2018
Interaction avec bioinfos durant le workshop

#2798 · opened Nov 17, 2017 by Mathieu Giraud Web 2017.11 client-api com-vw-vidjil-workshop repseq-formats repseq-platform server-api
- CLOSED
- 1
updated Nov 29, 2017
Mettre à jour (et renommer) format-analysis.org

#2797 · opened Nov 17, 2017 by Mathieu Giraud Web 2018.01 repseq-formats repseq-platform
- 1
updated Sep 07, 2018
`-y all`: on devrait avoir les séquences consensus dans `.vdj.fa`

#2239 · opened Mar 09, 2017 by Mathieu Giraud Algo 2017.03 !!-bug +-deploy Paris-Pitié cpp repseq-formats
- CLOSED
- 2
updated Mar 29, 2017
Tracer la version de germlines utilisée dans l'algo

#2155 · opened Feb 01, 2017 by Mathieu Giraud Algo 2017.03 #-vodooj bio-control cpp repseq-formats
- CLOSED
- 1
- 1
updated Sep 07, 2018
Charger des fichiers BAM

#2016 · opened Nov 29, 2016 by Vidjil Team Algo 2017.07 +-merge LIL-Lille cpp feature priority-2 repseq-formats sequencers-Ion
- CLOSED
- 1
- 17
updated Jul 07, 2017
Ajouter l'organisme dans le fichier .vidjil

#1987 · opened Nov 29, 2016 by Vidjil Team Algo 2017.03 LIM-Limoges TOU-Toulouse bio-germlines bio-species priority-2 repseq-formats
- CLOSED
- 1
- 3
updated Feb 02, 2017
Grep reads et vidjil-algo : le fichier résultant peut mélanger FASTA et FASTQ

#3852 · opened Mar 20, 2019 by Mikaël Salson cpp cpp-export repseq-formats
- 6
updated Mar 21, 2019
Pertinence du format .vdj et documentation

#3795 · opened Mar 14, 2019 by Mathieu Giraud bikeshedding doc repseq-formats
- 0
updated Mar 14, 2019
Extend normalization with custom normalized_reads

#3645 · opened Nov 30, 2018 by Mathieu Giraud *-go Boldrini-Brasil client repseq-formats
- CLOSED
- 5
updated Dec 28, 2018
AIRR pour la plateforme web

#3591 · opened Oct 24, 2018 by Mathieu Giraud !-reflexion client next-audio repseq-community repseq-formats repseq-formats-airr
- 5
updated Jun 12, 2019
AIRR et nombre de reads : finalement duplicate_count ?

#3590 · opened Oct 24, 2018 by Mathieu Giraud bikeshedding repseq-formats repseq-formats-airr
- CLOSED
- 4
updated Oct 24, 2018
Labels should be stored in the fused file

#3585 · opened Oct 23, 2018 by Mikaël Salson *-go repseq-formats server-fuse user-request
- CLOSED
- 1
- 1
updated Dec 04, 2018
Supprimer / rationaliser le format .vdj des headers ?

#3566 · opened Oct 17, 2018 by Mathieu Giraud !-reflexion bikeshedding cpp repseq-formats
- 4
updated Oct 24, 2018
Use a fasta file for -l ?

#3563 · opened Oct 16, 2018 by Mathieu Giraud cpp cpp-options repseq-formats
- 1
updated Oct 16, 2018
Format pour transmettre les barplots widgets

#3451 · opened Sep 11, 2018 by Mathieu Giraud repseq-formats server-qc-stats
- CLOSED
- 0
updated Oct 08, 2018

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