GitLab

Fontello moved to HTTPS

Closes #4530

See merge request !830

Fix #4530

Fix review server

See merge request !825

doc/server.md: Add info on Let's encrypt to avoid copying certificates

See merge request !827

doc/server.md: example of config.json

See merge request !826

thanks to @flothoni

It seems to work best when UWSGI is already launched.
See vdj#1135

doc/server.md: new documentation on data migration

See merge request !824

Thanks to @duez and @flothoni

migrator.py; add a minor modification to allow to use a more explicit config json file

See merge request !821

Feature s/fix migrator script

See merge request !818

Feature s/fix migrator script

See merge request !816

log can fail if case of empty value

permission should always be defined on sample_set table, checking permissions on patient/run/generic table is not needed

Data migration between servers

See merge request !814

migrator.py : original provider's user_id of imported sequence file will be replaced with user_admin

migrator.py does not export user info

original creator id does not necessary match an user on the new database
it is not possible anymore to have an invalid creator id (foreign key error)

migrator.py : select sample_set with valid permission on sample_set table and not only on patient/generic/run tables

permission for sample_set seem to have changed over time and can be found on both

Remove result files that have been stored in DB

Closes #4388

See merge request !777

doc/index.md: remove french tutorial for now

See merge request !808

See #3801

Tuto 2020

Closes #2824, #2839, #2863, and #2865

See merge request !807

see vdj#1005

see #2865