- 12 Jul, 2019 1 commit
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Mathieu Giraud authored
should-vdj-to-tap.py: --ignore_D option not working due to typo Closes #3952 See merge request !494
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- 11 Jul, 2019 7 commits
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Mathieu Giraud authored
Update repseq_vdj for mixcr See merge request !495
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
doc/dev-{algo,client,server}.md: converted and split from dev.org See merge request !491
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Mikaël Salson authored
Fixed and added some tests Fix #3952
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Mikaël Salson authored
Feature t/3950 igrec parser Closes #3950 See merge request !493
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- 10 Jul, 2019 11 commits
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Mathieu Giraud authored
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Mathieu Giraud authored
These *.py files should be moved to /tools
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Mathieu Giraud authored
see #3950 Thanks to https://stackoverflow.com/a/8849771
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Mathieu Giraud authored
should-vdj-to-tap.py: Wildcard must be at both places See merge request !490
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Mathieu Giraud authored
see #3932 pandoc --wrap=preserve --atx-headers -s -r org doc/dev.org -t gfm > doc/dev.md
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Mikaël Salson authored
Follows dbd61c55. Contrarily to the else case where the joker can indifferently be placed before or after a term, it is not the same when the term is a paranthesis expression. Thus we need a joker both before and after to make sure we don't miss a case.
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Mathieu Giraud authored
Alternative regex bug Closes #3949 See merge request !489
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Mikaël Salson authored
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Mikaël Salson authored
We must allow anything *before* the alternative, not after (as in the else case)
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Mikaël Salson authored
Fix #3949
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Mikaël Salson authored
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- 05 Jul, 2019 2 commits
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Mikaël Salson authored
Docker : modify conf without rebuilding Closes #3941 See merge request !486
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Mikaël Salson authored
This allows to modify the configurations without rebuilding the image See #3941
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- 12 Jun, 2019 2 commits
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Mathieu Giraud authored
js/app.js: Load extra scripts depending on the administrator Closes #3929 See merge request !481
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Mikaël Salson authored
Fix #3929
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- 03 Jun, 2019 8 commits
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Mikaël Salson authored
V-QUEST API change Closes #3913 See merge request !472
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Mikaël Salson authored
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Mikaël Salson authored
Otherwise the ntseq is not given in the CSV file See #3913
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Mikaël Salson authored
IMGT/V-QUEST now requires to have the common name of the species, not the latin one. Thus we need a function to do the conversion. See #3913
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Mikaël Salson authored
Those parameters are not useful anymore. They were used before #3913.
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Mikaël Salson authored
Some parameters were slightly different from what was expected. See #3913
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Mikaël Salson authored
See #3913
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Mikaël Salson authored
See #3913
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- 24 May, 2019 2 commits
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Mathieu Giraud authored
Check permissions before retrieving results Closes vdj#880 See merge request !476
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Mikaël Salson authored
Fix vdj#880
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- 23 May, 2019 6 commits
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Mikaël Salson authored
Merge branch 'feature-c/3488-decalage-de-la-sequence-du-cdr3-et-de-la-jonction-dans-la-fenetre-info' into 'dev' Resolve "Décalage de la séquence du CDR3 et de la jonction dans la fenêtre info" Closes #3488 See merge request !471
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Mathieu Giraud authored
Resolve "Avoir des germline de poulet" Closes #3910 See merge request !470
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Mathieu Giraud authored
link to #3910
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Thonier Florian authored
link to #3910
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Thonier Florian authored
Link to #3910
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Thonier Florian authored
link to #3910
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- 22 May, 2019 1 commit
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Mathieu Giraud authored
doc/vidjil-algo.md: productivity discordance + server See merge request !475
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