1. 04 Jun, 2018 3 commits
  2. 05 Jan, 2017 1 commit
  3. 08 Nov, 2016 1 commit
    • Mikael Salson's avatar
      tools/fuse.py: By default process all the files · 5700724d
      Mikael Salson authored
      After discussions we considered it was better that by default all the files
      provided on the command line are processed. The option is useful to restrict
      the number of files fused from the server.
      5700724d
  4. 04 Nov, 2016 2 commits
  5. 03 Nov, 2016 1 commit
  6. 19 Oct, 2016 1 commit
  7. 18 Oct, 2016 1 commit
    • Mikael Salson's avatar
      fuse.py: Change the criterion to decide information on which sample is chosen · 0d40d04c
      Mikael Salson authored
      Previously, the informations coming from the best top were kept.
      However we could have a sequence in the top 1, with few reads, in a poorly segmented dataset that
      was preferred over a top 2 sequence with lots of reads in a highly segmented dataset.
      
      Now we just take into account the number of reads, by assuming with the higher number
      of reads we should have the higher reliability. This should be a better criterion than the previous
      one (wishful thinking).
      0d40d04c
  8. 22 Sep, 2016 4 commits
  9. 27 Jun, 2016 1 commit
  10. 22 Jun, 2016 1 commit
  11. 20 Jan, 2016 1 commit
  12. 09 Sep, 2015 1 commit
  13. 30 Jul, 2015 3 commits
  14. 10 Jul, 2015 1 commit
  15. 09 Jul, 2015 1 commit
  16. 29 Jun, 2015 1 commit
  17. 25 Jun, 2015 1 commit
  18. 12 Jun, 2015 1 commit
  19. 21 May, 2015 1 commit
  20. 19 May, 2015 1 commit
  21. 24 Apr, 2015 1 commit
  22. 14 Apr, 2015 3 commits
  23. 25 Feb, 2015 1 commit
  24. 24 Feb, 2015 1 commit
    • Mathieu Giraud's avatar
      fuse.py: load() calls either load_vidjil() or load_clntab() · b925093e
      Mathieu Giraud authored
      Previously, load_clntab() was launched when there was an exception raised by load_vidjil().
      This was error prone, moreover we need the get the proper exception when there is a real error in load_vidjil().
      
      Now the check is on the file name ('.clntab'). There could be better strategies, but
      the detection of the file type has to be separated from the parsing itself.
      b925093e
  25. 21 Feb, 2015 1 commit
  26. 20 Feb, 2015 2 commits
  27. 18 Feb, 2015 2 commits
  28. 17 Feb, 2015 1 commit