- 05 Oct, 2018 25 commits
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Ryan Herbert authored
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Ryan Herbert authored
See #3497
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Ryan Herbert authored
See #3497
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Ryan Herbert authored
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Ryan Herbert authored
instead of creating a new file, write the information under reads -> distribution
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Ryan Herbert authored
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Ryan Herbert authored
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Ryan Herbert authored
to fix execution time.
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Ryan Herbert authored
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Ryan Herbert authored
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Ryan Herbert authored
the barplot had nothing to do with a genescan and is just an example.
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Ryan Herbert authored
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Ryan Herbert authored
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Ryan Herbert authored
See #3452
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Ryan Herbert authored
Refactor the function to work like vidjil works. Write the output to a file with the suffix vidjil.extra
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Ryan Herbert authored
takes a min threshold and returns a dict with the number of clones per locus above the percentage threshold of the total reads for that locus. See #3454
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Ryan Herbert authored
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Ryan Herbert authored
See #3456
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Ryan Herbert authored
We don't want files to appear multiple times if they are present in multiple sample sets. In order to achieve this, we retrieve the information from the results_file and group all the sample_sets into an array for each results_file. A new SetDecorator displays the list of sets how we want them. See 3407
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Ryan Herbert authored
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Ryan Herbert authored
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Ryan Herbert authored
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Ryan Herbert authored
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Ryan Herbert authored
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Ryan Herbert authored
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- 28 Sep, 2018 1 commit
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Mikaël Salson authored
Feature c/3325 display codons Closes #3325 See merge request !296
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- 27 Sep, 2018 12 commits
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Mathieu Giraud authored
Close #3325.
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
See #3325. Could be improved, there are string manipulations here.
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Mathieu Giraud authored
See #3485. Same technique than in 8af03769.
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Mathieu Giraud authored
See #3325.
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Mathieu Giraud authored
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Mathieu Giraud authored
(could be later bikesheded)
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Mathieu Giraud authored
Resolve "Extraire/tester isProductive/referencePhase dans clone.js" Closes #3483 See merge request !295
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Mikaël Salson authored
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Mikaël Salson authored
This is a bit tricky, we should warn coders properly. And we test that this is actually the case. See c3bbaf4c
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Mikaël Salson authored
See #3483
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- 26 Sep, 2018 2 commits
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Mikaël Salson authored
Feature c/2056 display synonymous mutations Closes #2056 See merge request !232
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Mikaël Salson authored
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