1. 16 Oct, 2018 1 commit
  2. 02 Oct, 2018 1 commit
    • Mikael Salson's avatar
      algo/vidjil: Change default for -Z · af613205
      Mikael Salson authored
      With #3225 we don't have a fixed limit on the number of sequences to get.
      We will get all the sequences that have a common number of k-mers close to the first sequence.
      af613205
  3. 20 Jul, 2018 2 commits
  4. 17 Jul, 2018 1 commit
  5. 13 Jul, 2018 1 commit
  6. 11 Jul, 2018 1 commit
  7. 10 Jul, 2018 1 commit
  8. 07 Jul, 2018 1 commit
    • Mathieu Giraud's avatar
      algo/vidjil.cpp: enable filtering by defaut, -Z 3 · 6d1b5a10
      Mathieu Giraud authored
      Thanks to the work by @boreec, we now enable by default
      the filtering for the second pass of the clone analysis.
      
      When the computing time is dominated by the FineSegmenter
      (such as with '-c clones -z 10000' or '-c segment'),
      we get final speed-ups between 2x and 15x (#2360).
      
      We could even set -Z 1 in most of the cases, but it should
      be coupled with #3225. See also #3297 and #3344.
      
      Close #3298.
      6d1b5a10
  9. 05 Jul, 2018 4 commits
  10. 04 Jul, 2018 3 commits
  11. 27 Jun, 2018 1 commit
  12. 26 Jun, 2018 1 commit
  13. 23 Jun, 2018 1 commit
  14. 21 Jun, 2018 2 commits
  15. 18 Jun, 2018 19 commits