Commit f78c6fc3 authored by Mathieu Giraud's avatar Mathieu Giraud

core/segment.h, vidjil.cpp: rename unsegmentation messages to "only V/5'" and "only J/3'"

parent 7ca4471e
......@@ -61,7 +61,7 @@ const char* const segmented_mesg[] = { "?",
"SEG",
"SEG_+", "SEG_-",
"UNSEG too short", "UNSEG strand",
"UNSEG too few V/J", "UNSEG only V", "UNSEG only J",
"UNSEG too few V/J", "UNSEG only V/5'", "UNSEG only J/3'",
"UNSEG < delta_min", "UNSEG ambiguous",
"UNSEG too short w",
} ;
......
......@@ -1040,6 +1040,7 @@ int main (int argc, char **argv)
replace(s.begin(), s.end(), ' ', '_');
replace(s.begin(), s.end(), '/', '_');
replace(s.begin(), s.end(), '<', '_');
replace(s.begin(), s.end(), '\'', '_');
string f_unsegmented_detail = out_dir + f_basename + "." + s + UNSEGMENTED_DETAIL_FILENAME ;
cout << " ==> " << f_unsegmented_detail << endl ;
......
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