Commit efdb557c authored by Mathieu Giraud's avatar Mathieu Giraud

doc/algo.org: update help on e-value

parent 000a7728
......@@ -181,8 +181,10 @@ different clones. Setting =-w= to lower values is not recommended.
The =-e= option sets the maximal e-value accepted for segmenting a sequence.
If a segmentation has a higher e-value, it will not be segmented.
The e-value computation takes into account both the number of reads in the
input sequence and the number of locus searched for.
The default value is 'all', but the recommended value is to use something
like 1e-6 for datasets with a billion of reads.
like 1, 1e-2 or 1.
Further help on this point will come in next releases.
** Threshold on clone output
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