Commit e229d617 authored by Mathieu Giraud's avatar Mathieu Giraud

vidjil: release 2015.03

parent b5afb528
This changelog concerns the algorithmic part (C++) of Vidjil.
2015-02-XX The Vidjil Team
2015-03-04 The Vidjil Team
* Better multi-germline analysis (-g), returning the best locus for each read (core/segment.cpp)
The incomplete rearrangement analysis (-i) can now safely be used.
The speed of this multi-germline analysis will be improved in a next release.
......@@ -9,7 +9,7 @@ This changelog concerns the algorithmic part (C++) of Vidjil.
* Included tools (tools/*.py) to process .vidjil files
* New statistics on the number of clones (core/germline.cpp)
* New experimental CDR3 detection (-3). We still advise to use IMGT/V-QUEST for better and complete results.
* Better debug option -u (.affect), especially in the case of multi-germline analysis
* Better debug option -K (.affect), especially in the case of multi-germline analysis
* Refactored dynamic programming computations (core/dynprog.cpp), experimental affine gaps
* Removed unused code parts as well as some files
* Streamlined flag processing in Makefiles
......
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