Commit e0501470 authored by Mathieu Giraud's avatar Mathieu Giraud

tests: update and clean

parent 5822e2a6
!LAUNCH: ../../vidjil -s '#####-#####' -w 100 -G ../../germline/IGH ../../data/Stanford_S22.fasta
!LOG: stanford-w100.log
$ Parses IGHV.fa germline
f1: 99341 bp in 341 sequences
$ Parses IGHD.fa germline
1: 1070 bp in 44 sequences
$ Parses germline/IGHJ.fa
1: 701 bp in 13 sequences
$ Find the good number of "too short sequences" for windows of size 100
1: SEG, no window -> 2217
......
!LAUNCH: ../../vidjil -V ../../germline/IGHV.fa -D ../../germline/IGHD.fa -J ../../germline/IGHJ.fa -s \\\\#\\\\#\\\\#\\\\#\\\\#\\\\#-\\\\#\\\\#\\\\#\\\\#\\\\#\\\\# ../../data/Stanford_S22.fasta
$ Parses IGHV.fa germline
f1: 99341 bp in 341 sequences
1: 100439 bp in 344 sequences
$ Parses IGHD.fa germline
1: 1070 bp in 44 sequences
......
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