Commit d959cd6d authored by Mathieu Giraud's avatar Mathieu Giraud

tests: update

parent 3e9d63df
Pipeline #21437 passed with stages
in 22 minutes and 11 seconds
......@@ -3,5 +3,5 @@
$ No clustering due to -w all
1: considering all analyzed reads as windows
$ Warning on similar clones in json
1: "code": "W53", "msg": "Similar to another clone IGHV3-48.01 .* IGHJ4.02"
$ Warning on similar clones in json ('warn' because this is a clone in the first 10 clones)
1: "code": "W53", "level": "warn", "msg": "Similar to another clone IGHV3-48.01 .* IGHJ4.02"
......@@ -64,4 +64,4 @@ $ All 'start' fields are 1-based, they never equal to zero
0: "start": 0
$ Warning on low coverage
1: "code": "W51", "msg": "Low coverage: 0.442"
1: "code": "W51", "level": "warn", "msg": "Low coverage: 0.442"
......@@ -4,7 +4,7 @@ $ Warning, -A
1:WARNING
$ Warning in json output
1: "code": "W20", "msg": "Very few V.D.J recombinations found: 0.00."
1: "code": "W20", "level": "warn", "msg": "Very few V.D.J recombinations found: 0.00."
$ Link to documentation
1:algo.org
......
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