Commit c534fe7e authored by Mathieu Giraud's avatar Mathieu Giraud

vidjil.cpp, -c germlines: adds 1 to have the correct number of kmers in ratios

parent 5331ec6c
......@@ -660,7 +660,7 @@ int main (int argc, char **argv)
reads->next();
nb_reads++;
string seq = reads->getSequence().sequence;
total_length += seq.length() - s;
total_length += seq.length() - s + 1;
KmerAffectAnalyser<KmerAffect> *kaa = new KmerAffectAnalyser<KmerAffect>(*index, seq);
......
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