Commit c4b7c8ba authored by Mikaël Salson's avatar Mikaël Salson

vidjil-format.md: Update documentation with starting positions at 1

Following 7139afc6 the examples were not correctly modified, leading to some inconsistencies.
parent 55499659
...@@ -72,9 +72,9 @@ or `clusters`, to further cluster some clones, see below). ...@@ -72,9 +72,9 @@ or `clusters`, to further cluster some clones, see below).
"top": 1, "top": 1,
"seg": "seg":
{ {
"5": {"name": "TRGV5*01", "start": 1, "stop": 86, "delRight":5}, "5": {"name": "TRGV5*01", "start": 1, "stop": 87, "delRight":5},
"3": {"name": "TRGJ1*02", "start": 89, "stop": 118, "delLeft":0}, "3": {"name": "TRGJ1*02", "start": 89, "stop": 118, "delLeft":0},
"cdr3": { "start": 77, "stop": 104, "seq": "gccacctgggccttattataagaaactc" } "cdr3": { "start": 78, "stop": 105, "seq": "gccacctgggccttattataagaaactc" }
} }
} }
...@@ -119,7 +119,7 @@ do a correct gathering. ...@@ -119,7 +119,7 @@ do a correct gathering.
"top": 1, "top": 1,
"seg": "seg":
{ {
"5": {"name": "TRGV5*01", "start": 1, "stop": 86, "delRight": 5}, "5": {"name": "TRGV5*01", "start": 1, "stop": 87, "delRight": 5},
"3": {"name": "TRGJ1*02", "start": 89, "stop": 118, "delLeft": 0} "3": {"name": "TRGJ1*02", "start": 89, "stop": 118, "delLeft": 0}
} }
}, },
......
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