Commit a6592c5e authored by flothoni's avatar flothoni

tools/flash2.py; fix file name

Link to #3911
parent 3ab6a177
Pipeline #94141 passed with stages
in 8 minutes and 15 seconds
......@@ -48,7 +48,7 @@ if exit_code > 0:
raise EnvironmentError("Flash2 failed")
try :
with gzip.open(f_out+".fastq.gz", 'w') as outFile:
with gzip.open(f_out, 'w') as outFile:
with open(f_out+'.extendedFrags.fastq', 'rb') as f1:
shutil.copyfileobj(f1, outFile)
if (args.keep_r1):
......
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