Commit a55c700d authored by Mathieu Giraud's avatar Mathieu Giraud Committed by Mikaël Salson

algo/vidjil.cpp: delta_min and seed go to 'build_from_json'

parent 2e7ec47a
......@@ -833,7 +833,8 @@ int main (int argc, char **argv)
for (pair <string, string> path_file: multi_germline_paths_and_files)
{
try {
multigermline->build_from_json(path_file.first, path_file.second, GERMLINES_REGULAR, trim_sequences);
multigermline->build_from_json(path_file.first, path_file.second, GERMLINES_REGULAR,
delta_min, seed, trim_sequences);
} catch (std::exception& e) {
cerr << ERROR_STRING << "Vidjil cannot properly read " << path_file.first << "/" << path_file.second << ": " << e.what() << endl;
exit(1);
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment