Commit 83554466 authored by Mikaël Salson's avatar Mikaël Salson

automaton.h: reindent

parent fd0d25e1
Pipeline #28209 passed with stages
in 25 minutes and 57 seconds
...@@ -80,18 +80,18 @@ public: ...@@ -80,18 +80,18 @@ public:
*/ */
virtual void *next(void *state, char c) = 0; virtual void *next(void *state, char c) = 0;
/** /**
* This function returns the number of times every Info appears in the * This function returns the number of times every Info appears in the
* given sequence. * given sequence.
* It returns a map containing the number of occurences per Info. * It returns a map containing the number of occurences per Info.
* @param seq: The sequence to be queried. It is passed through * @param seq: The sequence to be queried. It is passed through
* the automaton to identify matching k-mers and extract * the automaton to identify matching k-mers and extract
* the corresponding Info. * the corresponding Info.
* @param false: unused. * @param false: unused.
* @param seed: unused. * @param seed: unused.
*/ */
virtual map<Info,int> getMultiResults virtual map<Info,int> getMultiResults
(const seqtype &seq, bool no_revcomp=false, string seed = "") = 0; (const seqtype &seq, bool no_revcomp=false, string seed = "") = 0;
}; };
#define DNA_ALPHABET_SIZE 4 #define DNA_ALPHABET_SIZE 4
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