Commit 791f0f20 authored by Mikael Salson's avatar Mikael Salson Committed by Mathieu Giraud

representative.fq: Change quality to test ReadQualityScore

Now seq1 is longer than seq2 but its quality is worse so,
using ReadQualityScore, the second one should be preferred
over the first one.
parent 479391d8
@seq1
TAAAAAAAAAACCCCCCCCCCGGGGGGGGGGTTTTTTTTTTA
TAAAAAAAAAACCCCCCCCCCGGGGGGGGGGTTTTTTTTTTAGACGACTACGACGGATACTGACT
+
ABCDEFGHIJKLMNOPQRSTUVWXYZABCDEFGHIJKLMNOP
ABCDEFGHIIIIIIIIIIII*********************************************
@seq2
AAAACCCCCCCCCCGGGGGGGGGGTTTTTTTTTTATAGGGCGCGATCGACTTC
+
ABCDEFGHIJKLMNOPQRSTUVWXYZABCDEFGHIJ<------2->UVWXYZA
ABCDEFGHIIIIIIIIIIIIIIIIIIIIIIIIIIII<------2->IIIIIII
@seq3
GCGCGATCGACTTCTCGAGCATGTAGGCTACACGGTATAAAAAAAAAACCCCCCCCCCGGGGGGGGGGTTTTTT
+
ABCDEFGHIJKLMNOPQRSTUVWXYZABCDEFGHIJKLMNOPQRSTUVWXYZABCDEFGHIJKLMNOPQRSTUV
ABCDEFGHIHGFEDCBAABCDEFGHIHGFEDCBAABCDEFGHIHGFEDCBAABCDEFGHIHGFEDCBAABCDEF
@seq4
TATAGGGCGCGATCGACTTC
+
ABC<------4->NOPQRST
ABC<------4->DEFGHII
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